RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ST8SIA4Q92187 359 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 MBOAT4Q96T53 435 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 NRIP2Q9BQI9 281 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 ZNF649Q9BS31 505 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 PCGF1Q9BSM1 259 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 ADI1Q9BV57 179 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 ZNF747Q9BV97 191 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 JAM3Q9BX67 310 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 CHST5Q9GZS9 411 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 FAM234AQ9H0X4 552 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 SLITRK2Q9H156 845 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 METTL8Q9H825 291 aaKnown RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 RHOFQ9HBH0 211 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 INPP5EQ9NRR6 644 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 ACOXLQ9NUZ1 547 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 FAM118AQ9NWS6 357 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 FRRS1LQ9P0K9 344 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 SLC25A10Q9UBX3 287 aaPredicted RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 SLC7A11Q9UPY5 501 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 CAB39Q9Y376 341 aaPredicted RBP5.76□□□□□ -1.49
VPS50-218ENST00000485994 GMPPBQ9Y5P6 360 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
VPS50-218ENST00000485994 WNK1Q9H4A3 2382 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 A0A1B0GW55 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DAPL1A0PJW8 107 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ANKRD61A6NGH8 418 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 NKX6-3A6NJ46 265 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 RFPL4AA6NLU0 287 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 RFPL4AL1F8VTS6 287 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 K7N7A8 449 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 RPP14O95059 124 aaKnown RBP5.75□□□□□ -1.49
VPS50-218ENST00000485994 FADS2O95864 444 aaKnown RBP5.75□□□□□ -1.49
VPS50-218ENST00000485994 KNG1P01042 644 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 SFTPBP07988 381 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 CHRM2P08172 466 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L2P0CJ85 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L3P0CJ86 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L4P0CJ87 422 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L5P0CJ88 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L6P0CJ89 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L7P0CJ90 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 PRKACBP22694 351 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 PRDX2P32119 198 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 KIR3DL2P43630 455 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 IER3P46695 156 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ATP1B3P54709 279 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ACTA2P62736 377 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ACTG1P63261 375 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ACTG2P63267 376 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ACSM1Q08AH1 577 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 SMIM21Q3B7S5 101 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ZIK1Q3SY52 487 aaPredicted RBP5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4L9Q6RFH8 374 aaPredicted RBP5.75□□□□□ -1.49
VPS50-218ENST00000485994 FAM220AQ7Z4H9 259 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 COMMD2Q86X83 199 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 MKXQ8IYA7 352 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 Q8IYB0 196 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 PRSS35Q8N3Z0 413 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 C11orf42Q8N5U0 333 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 CD177Q8N6Q3 437 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 ZNRF1Q8ND25 227 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 OR5D13Q8NGL4 314 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 SGMS2Q8NHU3 365 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 SSMEM1Q8WWF3 244 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 LGALS12Q96DT0 336 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 RNFT2Q96EX2 444 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 PELI1Q96FA3 418 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 TBX5Q99593 518 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 TTTY10Q9BZA0 68 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 MEGF9Q9H1U4 602 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 GPR173Q9NS66 373 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 SNTG1Q9NSN8 517 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 DUX4Q9UBX2 424 aa5.75□□□□□ -1.49
VPS50-218ENST00000485994 RPL36Q9Y3U8 105 aaKnown RBP5.75□□□□□ -1.49
VPS50-218ENST00000485994 IGKV1-27A0A075B6S5 117 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 A0A1W2PPH5 198 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 ERICH4A6NGS2 130 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 OR4C45A6NMZ5 311 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 RNASEK-C17orf49H0YIS7 233 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 SLC1A7O00341 560 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 SYNGR1O43759 233 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 RGS9O75916 674 aaPredicted RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 NDUFA7O95182 113 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 TK1P04183 234 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 MELTFP08582 738 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 HTR1AP08908 422 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 DBTP11182 482 aaKnown RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 ATF1P18846 271 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 LMO1P25800 156 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 GABRA2P47869 451 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 RBP2P50120 134 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 OR12D2P58182 307 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 NANOS3P60323 173 aaKnown RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 ELF3P78545 371 aaPredicted RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 IKZF1Q13422 519 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 ALKBH1Q13686 389 aaKnown RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 BLMHQ13867 455 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 ZNF146Q15072 292 aa5.74□□□□□ -1.49
VPS50-218ENST00000485994 CNN3Q15417 329 aaKnown RBP5.74□□□□□ -1.49
VPS50-218ENST00000485994 AANATQ16613 207 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms