RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 CST6Q15828 149 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 RPEL1Q2QD12 228 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 CYHR1Q6ZMK1 362 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 LYZL2Q7Z4W2 148 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 LUZP2Q86TE4 346 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 MSRB3Q8IXL7 192 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 ZFP82Q8N141 532 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 CYB561A3Q8NBI2 242 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 MRPL20Q9BYC9 149 aaKnown RBP0.77□□□□□ -2.29
SFPQ-209ENST00000485454 TTTY12Q9BZ98 90 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 CD209Q9NNX6 404 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 TAC3Q9UHF0 121 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 NAGKQ9UJ70 344 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 FADS3Q9Y5Q0 445 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 COL4A1P02462 1669 aa0.77□□□□□ -2.29
SFPQ-209ENST00000485454 LCTP09848 1927 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 IGHV3-43A0A0B4J1X8 118 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 TRAV8-4A0A0B4J246 113 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 H3BMM0 161 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 NDUFS5O43920 106 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 MPDU1O75352 247 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 OR2A4O95047 310 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 AGTP01019 485 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 P01737 135 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 CATP04040 527 aaKnown RBP0.76□□□□□ -2.29
SFPQ-209ENST00000485454 ZNF22P17026 224 aaPredicted RBP0.76□□□□□ -2.29
SFPQ-209ENST00000485454 CRABP2P29373 138 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 TAS2R39P59534 338 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 PRDX4Q13162 271 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 GABRA6Q16445 453 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 SPANXN2Q5MJ10 180 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 TTC19Q6DKK2 380 aaPredicted RBP0.76□□□□□ -2.29
SFPQ-209ENST00000485454 HS3ST5Q8IZT8 346 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 PQLC3Q8N755 202 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 ZNF738Q8NE65 137 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 OR10Z1Q8NGY1 313 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 UBE2WQ96B02 151 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 OR2A7Q96R45 310 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 CCDC77Q9BR77 488 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 FAM192AQ9GZU8 254 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 GABARAPL1Q9H0R8 117 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 OR51B5Q9H339 312 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 KIR3DX1Q9H7L2 352 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 MYEF2Q9P2K5 600 aaKnown RBP0.76□□□□□ -2.29
SFPQ-209ENST00000485454 TMCC3Q9ULS5 477 aa0.76□□□□□ -2.29
SFPQ-209ENST00000485454 INSRP06213 1382 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 IGKV1D-37A0A075B6S9 117 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 A0A1W2PRD5 423 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 IGKV2-29A2NJV5 120 aaPredicted RBP0.75□□□□□ -2.29
SFPQ-209ENST00000485454 C19orf71A6NCJ1 209 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 J3QT63 122 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 UPK1AO00322 258 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 CRTAPO75718 401 aaPredicted RBP0.75□□□□□ -2.29
SFPQ-209ENST00000485454 OPN1SWP03999 348 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 RPL10AP62906 217 aaKnown RBP0.75□□□□□ -2.29
SFPQ-209ENST00000485454 PSG4Q00888 419 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 LAMTOR4Q0VGL1 99 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 FOXF1Q12946 379 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 C5orf64Q2M2E5 130 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 BEX5Q5H9J7 111 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 TCF23Q7RTU1 214 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 PRNTQ86SH4 94 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 DEFB119Q8N690 84 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 C8orf31Q8N9H6 132 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 LMX1AQ8TE12 382 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 ING5Q8WYH8 240 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 C9orf72Q96LT7 481 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 OPALINQ96PE5 141 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 SPACA5Q96QH8 159 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 MTG1Q9BT17 334 aaPredicted RBP0.75□□□□□ -2.29
SFPQ-209ENST00000485454 SRRQ9GZT4 340 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 KLF13Q9Y2Y9 288 aaPredicted RBP0.75□□□□□ -2.29
SFPQ-209ENST00000485454 U3KQK5 164 aa0.75□□□□□ -2.29
SFPQ-209ENST00000485454 F5H5P2 479 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 TEX46H3BTG2 121 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 HLA-AP01891 365 aaKnown RBP0.74□□□□□ -2.29
SFPQ-209ENST00000485454 UBCP0CG48 685 aaKnown RBP0.74□□□□□ -2.29
SFPQ-209ENST00000485454 ARL2P36404 184 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 GPR1P46091 355 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 PMVKQ15126 192 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 TMEM53Q6P2H8 277 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 ZNF767PQ75MW2 155 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 EIF3MQ7L2H7 374 aaKnown RBP0.74□□□□□ -2.29
SFPQ-209ENST00000485454 KIF2BQ8N4N8 673 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 LINC00337Q8N6G1 96 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 OR2V1Q8NHB1 315 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 TSEN15Q8WW01 171 aaKnown RBP0.74□□□□□ -2.29
SFPQ-209ENST00000485454 TNFRSF14Q92956 283 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 PYURFQ96I23 114 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 DEFB129Q9H1M3 183 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 PXMP2Q9NR77 195 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 RBM22Q9NW64 420 aaKnown RBP eCLIP0.74□□□□□ -2.296e-10■■■■□ 22.8
SFPQ-209ENST00000485454 PRO0628Q9UI54 55 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 HPCAL4Q9UM19 191 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 SHANK3Q9BYB0 1731 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 ADGRB3O60242 1522 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
SFPQ-209ENST00000485454 MDC1Q14676 2089 aaKnown RBP0.73□□□□□ -2.29
SFPQ-209ENST00000485454 SYNJ2BP-COX16A0A087WUM0 186 aa0.73□□□□□ -2.29
SFPQ-209ENST00000485454 ZNF860A6NHJ4 632 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms