RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	OR8U1	Q8NH10	309 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	LRRC20	Q8TCA0	184 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	TCP10L	Q8TDR4	215 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	RGP1	Q92546	391 aa	Predicted RBP	2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	HAUS1	Q96CS2	278 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	LRRC58	Q96CX6	371 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	SMR3A	Q99954	134 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	AGMAT	Q9BSE5	352 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	TOLLIP	Q9H0E2	274 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	RPP21	Q9H633	154 aa	Known RBP	2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	SYNDIG1	Q9H7V2	258 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	NOX3	Q9HBY0	568 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	VCX3A	Q9NNX9	186 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	HMG20A	Q9NP66	347 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	DDX19A	Q9NUU7	478 aa	Known RBP	2.59	□□□□□ -1.99
VPS8-223	ENST00000485024		Q9Y3F1	56 aa		2.59	□□□□□ -1.99
VPS8-223	ENST00000485024	NSD1	Q96L73	2696 aa	Predicted RBP	2.59	□□□□□ -2
VPS8-223	ENST00000485024	ECM29	Q5VYK3	1845 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	DENND4A	Q7Z401	1863 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	MIA3	Q5JRA6	1907 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	KIAA1109	Q2LD37	5005 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	AKAP9	Q99996	3911 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	GATC	O43716	136 aa	Known RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ANGPTL7	O43827	346 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	BCHE	P06276	602 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CTSL	P07711	333 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	TCN2	P20062	427 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CCNO	P22674	350 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	IVD	P26440	423 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	SSTR5	P35346	364 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	PCK1	P35558	622 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	ARR3	P36575	388 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CFHR2	P36980	270 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	RBM34	P42696	430 aa	Known RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ERF	P50548	548 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZNF133	P52736	654 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZNF136	P52737	540 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CRISP3	P54108	245 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	OR2B8P	P59922	312 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	RPS23	P62266	143 aa	Known RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	CAPRIN1	Q14444	709 aa	Known RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	PON2	Q15165	354 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	GABRA6	Q16445	453 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZNF829	Q3KNS6	432 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZNF658B	Q4V348	819 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	TSPO2	Q5TGU0	170 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	THOC7	Q6I9Y2	204 aa	Known RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	KIF2B	Q8N4N8	673 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CSGALNACT2	Q8N6G5	542 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024		Q8N976	141 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	ASZ1	Q8WWH4	475 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZMYND19	Q96E35	227 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	ZNF681	Q96N22	645 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	CAMK2N2	Q96S95	79 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	TEAD3	Q99594	435 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	LCE3D	Q9BYE3	92 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	SAV1	Q9H4B6	383 aa	Predicted RBP	2.58	□□□□□ -2
VPS8-223	ENST00000485024	SLC40A1	Q9NP59	571 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	LHX9	Q9NQ69	397 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	NYAP2	Q9P242	653 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	KPTN	Q9Y664	436 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	BSN	Q9UPA5	3926 aa		2.58	□□□□□ -2
VPS8-223	ENST00000485024	LOC100506127	A0A0U1RQW1	187 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024		H7C2Y5	167 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024		H7C417	338 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	TAAR5	O14804	337 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	NVL	O15381	856 aa	Known RBP	2.57	□□□□□ -2
VPS8-223	ENST00000485024	CD5L	O43866	347 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	RAD1	O60671	282 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	UPK1B	O75841	260 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	CAT	P04040	527 aa	Known RBP	2.57	□□□□□ -2
VPS8-223	ENST00000485024	IGHV1-8	P0DP01	117 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	COX6B1	P14854	86 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	MDK	P21741	143 aa	Predicted RBP	2.57	□□□□□ -2
VPS8-223	ENST00000485024	ARL2	P36404	184 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	TALDO1	P37837	337 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	PPIC	P45877	212 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	RPS10	P46783	165 aa	Known RBP	2.57	□□□□□ -2
VPS8-223	ENST00000485024	ATP6V0D1	P61421	351 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	RAP1A	P62834	184 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	C2orf54	Q08AI8	447 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	DGCR6	Q14129	220 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	TSC22D1	Q15714	1073 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	ATP6V1F	Q16864	119 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024		Q3ZCU0	254 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	FBXW12	Q6X9E4	464 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	TMPRSS11A	Q6ZMR5	421 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	LINC00336	Q6ZUF6	198 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	NDUFAF7	Q7L592	441 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	SNX20	Q7Z614	316 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	SGTB	Q96EQ0	304 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	SCGB3A2	Q96PL1	93 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	OR2A5	Q96R48	311 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	TIMM17A	Q99595	171 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	HSD17B10	Q99714	261 aa	Known RBP	2.57	□□□□□ -2
VPS8-223	ENST00000485024	SLC17A9	Q9BYT1	436 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	OR2AG1	Q9H205	316 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	SPNS1	Q9H2V7	528 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms