RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PPA2Q9H2U2 334 aa10.97□□□□□ -0.65
CTDSP1-208ENST00000482272 C19orf12Q9NSK7 152 aa10.97□□□□□ -0.65
CTDSP1-208ENST00000482272 USE1Q9NZ43 259 aa10.97□□□□□ -0.65
CTDSP1-208ENST00000482272 OR14J1Q9UGF5 321 aa10.97□□□□□ -0.65
CTDSP1-208ENST00000482272 A6NIN4 97 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 H3BUX3 64 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 SERPINA3P01011 423 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 PDLIM3Q53GG5 364 aaPredicted RBP10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 C1orf146Q5VVC0 180 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 HCP5Q6MZN7 132 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 Q6ZSR3 168 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 CALHM1Q8IU99 346 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 MKXQ8IYA7 352 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 BATF2Q8N1L9 274 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 DTX3Q8N9I9 347 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 CCDC54Q8NEL0 328 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 OR4M1Q8NGD0 313 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 TBX5Q99593 518 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 NRIP2Q9BQI9 281 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 HES4Q9HCC6 221 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 RAB18Q9NP72 206 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 FBLN5Q9UBX5 448 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 SLC22A13Q9Y226 551 aa10.96□□□□□ -0.65
CTDSP1-208ENST00000482272 FAM230AA0A1W2PPH8 454 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 METTL15A6NJ78 407 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 SYT7O43581 403 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 SULT1C4O75897 302 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 APOL3O95236 402 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 TK1P04183 234 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 CHRM2P08172 466 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 CCL1P22362 96 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 MPZP25189 248 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 HTR1FP30939 366 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 CEBPDP49716 269 aaPredicted RBP10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 ERVFRD-1P60508 538 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 IL24Q13007 206 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 TMED1Q13445 227 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 AANATQ16613 207 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 ODF4Q2M2E3 257 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 LRRC75BQ2VPJ9 315 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 CATSPERDQ86XM0 798 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 OR8J1Q8NGP2 316 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 TRMT10AQ8TBZ6 339 aaKnown RBP10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 C17orf50Q8WW18 174 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 CIB1Q99828 191 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 MGAM2Q2M2H8 2515 aa10.95□□□□□ -0.66
CTDSP1-208ENST00000482272 A0A1W2PQL4 384 aaPredicted RBP10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 GATBO75879 557 aaKnown RBP10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 PAX6P26367 422 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 GABRA5P31644 462 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 KIR2DS4P43632 304 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 FUT6P51993 359 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 ERVK11-1P61568 191 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 LY6EQ16553 131 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 C11orf88Q6PI97 169 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 RORBQ92753 470 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 RFKQ969G6 155 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 AJUBAQ96IF1 538 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 OSBPL10Q9BXB5 764 aa10.94□□□□□ -0.66
CTDSP1-208ENST00000482272 MEGF11A6BM72 1044 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 H3BSH0 61 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 K7N7A8 449 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 CCL3L1P16619 93 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 CDC42P60953 191 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 COL10A1Q03692 680 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 UBE2V2Q15819 145 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 Q6ZTK2 550 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 GDPD3Q7L5L3 318 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 EGFL6Q8IUX8 553 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 ASCC1Q8N9N2 400 aaKnown RBP10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 OR13D1Q8NGV5 346 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 C10orf35Q96D05 121 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 BORCS8Q96FH0 119 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 CENPNQ96H22 339 aaPredicted RBP10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 CEP19Q96LK0 163 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 RIBC2Q9H4K1 309 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 MTCH1Q9NZJ7 389 aa10.93□□□□□ -0.66
CTDSP1-208ENST00000482272 C17orf98A8MV24 154 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 CIB2O75838 187 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 PIPP12273 146 aaPredicted RBP10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 COX7A1P24310 79 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 EDDM3BP56851 147 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 ZNF273Q14593 569 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 HERPUD1Q15011 391 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 CNN3Q15417 329 aaKnown RBP10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 C2orf68Q2NKX9 166 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 LIAT1Q6ZQX7 453 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 FAM220AQ7Z4H9 259 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 OR2T6Q8NHC8 308 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 TRUB1Q8WWH5 349 aaKnown RBP10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 EME1Q96AY2 570 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 GABARAPL3Q9BY60 117 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 CHST5Q9GZS9 411 aa10.92□□□□□ -0.66
CTDSP1-208ENST00000482272 RANBP3Q9H6Z4 567 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms