RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 LRP11Q86VZ4 500 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 LAX1Q8IWV1 398 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CLEC18CQ8NCF0 446 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OR8G5Q8NG78 346 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OR5H6Q8NGV6 325 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ZNF671Q8TAW3 534 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OR5P3Q8WZ94 311 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 GTF3AQ92664 365 aaKnown RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 NEUROG1Q92886 237 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 RFT1Q96AA3 541 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 FAM3DQ96BQ1 224 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 SLC25A38Q96DW6 304 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 BORCS8Q96FH0 119 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CPNE2Q96FN4 548 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 C1orf147Q96MC9 270 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 SORCS2Q96PQ0 1159 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MRI1Q9BV20 369 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MRPL37Q9BZE1 423 aaKnown RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 MIXL1Q9H2W2 232 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 KCNK15Q9H427 330 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 NEK6Q9HC98 313 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 AKIP1Q9NQ31 210 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ABRACLQ9P1F3 81 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MYEF2Q9P2K5 600 aaKnown RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 COMMD3Q9UBI1 195 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 POU2F3Q9UKI9 436 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 SPATA2Q9UM82 520 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 SLC7A11Q9UPY5 501 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MRPS28Q9Y2Q9 187 aaKnown RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 NOP16Q9Y3C1 178 aaKnown RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 CMAHPQ9Y471 501 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 KLF2Q9Y5W3 355 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 PEX16Q9Y5Y5 336 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ETV7Q9Y603 341 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 LRBAP50851 2863 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 POLQO75417 2590 aa5.65□□□□□ -1.51
USP48-208ENST00000479177 UNC79Q9P2D8 2635 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 TMEM272A0A1B0GTI8 110 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 FAM230AA0A1W2PPH8 454 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 E7EQL1 145 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 LDLRAD4O15165 306 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 MLNRO43193 412 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 HPGDSO60760 199 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PLAUP00749 431 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 EIF4EP06730 217 aaKnown RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 OR4A8P0C604 315 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 UBBP0CG47 229 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PLA2G2AP14555 144 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PTGFRP43088 359 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 ALDH3B1P43353 468 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 RBP2P50120 134 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 GPM6AP51674 278 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 FUT6P51993 359 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 CAPZA1P52907 286 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 ATP1B3P54709 279 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 MTCP1P56278 107 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 GNG3P63215 75 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 QRFPP83859 136 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 CD83Q01151 205 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PLA2G7Q13093 441 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 OR8G1Q15617 311 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 ZNF672Q499Z4 452 aaPredicted RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 UBE2NLQ5JXB2 153 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 AWAT2Q6E213 333 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 CCDC190Q86UF4 302 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 SAMD12Q8N8I0 201 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PNLDC1Q8NA58 520 aaKnown RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 OR10AD1Q8NGE0 317 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 OR51D1Q8NGF3 324 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 OR5A2Q8NGI9 324 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 OR5D18Q8NGL1 313 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 LILRB1Q8NHL6 650 aaPredicted RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 TNFAIP8L1Q8WVP5 186 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 NINJ1Q92982 152 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 PIK3IP1Q96FE7 263 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 GPER1Q99527 375 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 MICU1Q9BPX6 476 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 RTL8AQ9BWD3 113 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 SLC22A4Q9H015 551 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 MSL2Q9HCI7 577 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 TMEM100Q9NV29 134 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 CDC42EP3Q9UKI2 254 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 HECTD1Q9ULT8 2610 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 RAI1Q7Z5J4 1906 aaPredicted RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 NAV2Q8IVL1 2488 aa5.64□□□□□ -1.51
USP48-208ENST00000479177 CHD3Q12873 2000 aaKnown RBP5.64□□□□□ -1.51
USP48-208ENST00000479177 IGKV1-12A0A0C4DH73 117 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 LRP5LA4QPB2 252 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 TMEM210A6NLX4 147 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 TMEM14DPA8MWL7 114 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 ZNF732B4DXR9 585 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 H0YL77 283 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 J3QT63 122 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 RGS5O15539 181 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 SPRY1O43609 319 aaPredicted RBP5.63□□□□□ -1.51
USP48-208ENST00000479177 IGKV1D-12P01611 117 aa5.63□□□□□ -1.51
USP48-208ENST00000479177 APOA1P02647 267 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms