RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SLC25A26Q70HW3 274 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 SERPINA12Q8IW75 414 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 FGFRL1Q8N441 504 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 PARP16Q8N5Y8 322 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 OR5D18Q8NGL1 313 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 SLAMF9Q96A28 289 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 TMIGD2Q96BF3 282 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 OPALINQ96PE5 141 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 NKX3-1Q99801 234 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 NRIP2Q9BQI9 281 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 ZCCHC4Q9H5U6 513 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 NLKQ9UBE8 527 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 LSM2Q9Y333 95 aaKnown RBP8.55□□□□□ -1.04
HDAC6-222ENST00000478095 TANC2Q9HCD6 1990 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 DYSFO75923 2080 aa8.55□□□□□ -1.04
HDAC6-222ENST00000478095 CHD3Q12873 2000 aaKnown RBP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 IGKV1D-17A0A075B6S4 117 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 A0A0G2JMP0 313 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 A0A0X1KG70 313 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 NKX6-3A6NJ46 265 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 OR2AT4A6NND4 320 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 A8MXK9 166 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 C22orf46C9J442 243 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 F8VVB4 439 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 F8VWA3 439 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 DVL1O14640 695 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 DENRO43583 198 aaKnown RBP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 SPRY1O43609 319 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 NDUFA2O43678 99 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 SULT1B1O43704 296 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 ANGPTL7O43827 346 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 NXPH2O95156 264 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 CD2P06729 351 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 HCKP08631 526 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 HSMCR30P0CW71 290 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 CALCBP10092 127 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 AMY2BP19961 511 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 GABRA2P47869 451 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 CEBPDP49716 269 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 ATP1B3P54709 279 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 RPS11P62280 158 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 IL24Q13007 206 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 SPHARQ15513 63 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 CHRFAM7AQ494W8 412 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 RNLSQ5VYX0 342 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 ACP7Q6ZNF0 438 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 LHFPL2Q6ZUX7 228 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 DNAAF1Q8NEP3 725 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 OR4M2Q8NGB6 313 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 OR51A2Q8NGJ7 313 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 ST8SIA4Q92187 359 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 TMEM106AQ96A25 262 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 SPSB1Q96BD6 273 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 C12orf43Q96C57 262 aaKnown RBP8.54□□□□□ -1.04
HDAC6-222ENST00000478095 GAFA1Q96PS6 74 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 BEX2Q9BXY8 128 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 PKIBQ9C010 78 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 TMEM160Q9NX00 188 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 MTCH1Q9NZJ7 389 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 CDC42EP3Q9UKI2 254 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 BLOC1S6Q9UL45 172 aa8.54□□□□□ -1.04
HDAC6-222ENST00000478095 SONP18583 2426 aaKnown RBP8.53□□□□□ -1.04
HDAC6-222ENST00000478095 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 TRBV5-5A0A0J9YX44 114 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 A0A1W2PPK0 400 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 RFPL4AA6NLU0 287 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 RFPL4AL1F8VTS6 287 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 PSG2P11465 335 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 ADRA2CP18825 462 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 RAB3AP20336 220 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 HNF1AP20823 631 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 PCMT1P22061 227 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 SRP14P37108 136 aaKnown RBP8.53□□□□□ -1.04
HDAC6-222ENST00000478095 BDH1Q02338 343 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 INSL4Q14641 139 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 DGUOKQ16854 277 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 SMIM21Q3B7S5 101 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 Q499Y3 187 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 YIF1BQ5BJH7 314 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 PRSS48Q7RTY5 328 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 SLC36A1Q7Z2H8 476 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 ANGPTL6Q8NI99 470 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 CEP19Q96LK0 163 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 TMED9Q9BVK6 235 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 C7orf69Q9H7B7 122 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 NEK6Q9HC98 313 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 RBFOX1Q9NWB1 397 aaKnown RBP8.53□□□□□ -1.04
HDAC6-222ENST00000478095 OR14J1Q9UGF5 321 aa8.53□□□□□ -1.04
HDAC6-222ENST00000478095 TRAV8-7A0A075B6U6 113 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 IGHV2-70DA0A0C4DH43 119 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 IGKV1-12A0A0C4DH73 117 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 MAGEA13PA6NCF6 341 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 NOS1APO75052 506 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-222ENST00000478095 IGKV1D-12P01611 117 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 SRD5A1P18405 259 aa8.52□□□□□ -1.05
HDAC6-222ENST00000478095 BCL3P20749 454 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms