RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 BORCS8Q96FH0 119 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 NRIP2Q9BQI9 281 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 MS4A7Q9GZW8 240 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 COMMD4Q9H0A8 199 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 RHOFQ9HBH0 211 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 SNTG1Q9NSN8 517 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 ZNF222Q9UK12 451 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 CAB39Q9Y376 341 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
SOX2-OT-208ENST00000477928 OR4C45A6NMZ5 311 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 H3BSH0 61 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 TOX4O94842 621 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 PSG2P11465 335 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 MMP9P14780 707 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 ZNF20P17024 532 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 CAPGP40121 348 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 ATP1B3P54709 279 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 NANOS3P60323 173 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 UBE2V2Q15819 145 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 ODF4Q2M2E3 257 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 MKXQ8IYA7 352 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 C8orf59Q8N0T1 100 aaPredicted RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 ZNF676Q8N7Q3 588 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 NPRL2Q8WTW4 380 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 WDFY2Q96P53 400 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 GAFA1Q96PS6 74 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 PCGF1Q9BSM1 259 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 KRTAP3-3Q9BYR6 98 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 FAM234AQ9H0X4 552 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 PRDM13Q9H4Q3 707 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 AMBNQ9NP70 447 aa11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 CHCHD3Q9NX63 227 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 CNOT2Q9NZN8 540 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-208ENST00000477928 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 A6NIN4 97 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 CLDN34H7C241 214 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 SLC1A7O00341 560 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 CYB5AP00167 134 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 KNG1P01042 644 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 ATF1P18846 271 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 MYL12AP19105 171 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 CFPP27918 469 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 SLC34A1Q06495 639 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 IKZF1Q13422 519 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 RPL22L1Q6P5R6 122 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 PDZD9Q8IXQ8 264 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 FBLIM1Q8WUP2 373 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 CPNE2Q96FN4 548 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 SIRPDQ9H106 197 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
SOX2-OT-208ENST00000477928 FAM230AA0A1W2PPH8 454 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 EFCAB10A6NFE3 127 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 M0R1W7 72 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 SYNGR1O43759 233 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 NXPH2O95156 264 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 LIMS3P0CW19 117 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 LIMS4P0CW20 117 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 GABRA2P47869 451 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 DEFB112Q30KQ8 113 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 FIP1L1Q6UN15 594 aaKnown RBP11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 C12orf54Q6X4T0 127 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 CALHM1Q8IU99 346 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 SERPINA12Q8IW75 414 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 RDH10Q8IZV5 341 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 OR5D14Q8NGL3 314 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 OR52N1Q8NH53 320 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 OR5AK2Q8NH90 309 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 RPS4Y2Q8TD47 263 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 GATAD2BQ8WXI9 593 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 GCDHQ92947 438 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 ADAT3Q96EY9 351 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 CEP19Q96LK0 163 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 ZNF488Q96MN9 340 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 OPALINQ96PE5 141 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 VCX3BQ9H321 246 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 ELL3Q9HB65 397 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 NOX4Q9NPH5 578 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 TNFRSF19Q9NS68 423 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 PLCXD1Q9NUJ7 323 aa11.38□□□□□ -0.59
SOX2-OT-208ENST00000477928 TRBV2A0A0J9YWF9 115 aa11.37□□□□□ -0.59
SOX2-OT-208ENST00000477928 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
SOX2-OT-208ENST00000477928 RFPL4AA6NLU0 287 aa11.37□□□□□ -0.59
SOX2-OT-208ENST00000477928 RFPL4AL1F8VTS6 287 aa11.37□□□□□ -0.59
SOX2-OT-208ENST00000477928 ZFPL1O95159 310 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms