RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 CD177Q8N6Q3 437 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
CLDN11-204ENST00000477531 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
CLDN11-204ENST00000477531 EME1Q96AY2 570 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 PKIBQ9C010 78 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 FAM234AQ9H0X4 552 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 HEXA-AS1Q9H8Q6 139 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 OR14J1Q9UGF5 321 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
CLDN11-204ENST00000477531 CCL1P22362 96 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 MPZP25189 248 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 TGFBR2P37173 567 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 FUT6P51993 359 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 MIDNQ504T8 468 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 PYDC1Q8WXC3 89 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 RORBQ92753 470 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
CLDN11-204ENST00000477531 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 H3BSH0 61 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 TIMM23O14925 209 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 UBCP0CG48 685 aaKnown RBP12.85□□□□□ -0.35
CLDN11-204ENST00000477531 LGALS4P56470 323 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 IL24Q13007 206 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 TAF9Q16594 264 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 PNKDQ8N490 385 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-204ENST00000477531 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 C10orf35Q96D05 121 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 BORCS8Q96FH0 119 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 C19orf12Q9NSK7 152 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 USE1Q9NZ43 259 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 PKD1L1Q8TDX9 2849 aa12.85□□□□□ -0.35
CLDN11-204ENST00000477531 M0QZ24 198 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CYB5AP00167 134 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 TK1P04183 234 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CHRM2P08172 466 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 ACTC1P68032 377 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 ACTA1P68133 377 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 SRSF4Q08170 494 aaKnown RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 TMEM244Q5VVB8 128 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 TMEM200BQ69YZ2 307 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 ZFP1Q6P2D0 407 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CALHM1Q8IU99 346 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 MKXQ8IYA7 352 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 ASCC1Q8N9N2 400 aaKnown RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 MRPL48Q96GC5 212 aaKnown RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CEP19Q96LK0 163 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 MYCBPQ99417 103 aaPredicted RBP12.84□□□□□ -0.35
CLDN11-204ENST00000477531 CITED1Q99966 193 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 HES4Q9HCC6 221 aa12.84□□□□□ -0.35
CLDN11-204ENST00000477531 LOC107986453A0A1B0GWG9 222 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 DAPL1A0PJW8 107 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 OCM2P0CE71 109 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 OCMP0CE72 109 aaPredicted RBP12.83□□□□□ -0.36
CLDN11-204ENST00000477531 ERVFRD-1P60508 538 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 UBE2V2Q15819 145 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 TP53I3Q53FA7 332 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 MEDAGQ5VYS4 303 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 Q6ZSV7 163 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 RNFT2Q96EX2 444 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 HRASLS5Q96KN8 279 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 SSX3Q99909 188 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 CHST5Q9GZS9 411 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 C16orf95Q9H693 158 aa12.83□□□□□ -0.36
CLDN11-204ENST00000477531 H3BUX3 64 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 K7N7A8 449 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ENTPD6O75354 484 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 CLPXO76031 633 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 INMTO95050 263 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ALPLP05186 524 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF20P17024 532 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 COX7A1P24310 79 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 RBP2P50120 134 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ALDH3A2P51648 485 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ATP1B3P54709 279 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 COL10A1Q03692 680 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF85Q03923 595 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 EGFL6Q8IUX8 553 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 Q8IYB0 196 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 PRSS35Q8N3Z0 413 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 SLAMF9Q96A28 289 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 PPA2Q9H2U2 334 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 RAB18Q9NP72 206 aa12.82□□□□□ -0.36
CLDN11-204ENST00000477531 GLS2Q9UI32 602 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms