RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580		F8VWA3	439 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	CEBPD	P49716	269 aa	Predicted RBP	13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	KLHL22	Q53GT1	634 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	TTC23	Q5W5X9	447 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	UTS2B	Q765I0	119 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580		Q8N7P7	452 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	FGGY	Q96C11	551 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	MRPL48	Q96GC5	212 aa	Known RBP	13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	PRDM13	Q9H4Q3	707 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	MTCH1	Q9NZJ7	389 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	HHLA2	Q9UM44	414 aa		13.63	□□□□□ -0.23
VPS8-222	ENST00000475580	DNAJC9-AS1	A6NH13	148 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	ZFPL1	O95159	310 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	NDUFB7	P17568	137 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	ATF1	P18846	271 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	CNN3	Q15417	329 aa	Known RBP	13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	DEFB112	Q30KQ8	113 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	GPR157	Q5UAW9	335 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	VMO1	Q7Z5L0	202 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	DHRSX	Q8N5I4	330 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	KIR3DL3	Q8N743	410 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	TMEM185A	Q8NFB2	350 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	H1FX	Q92522	213 aa	Known RBP	13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	BORCS8	Q96FH0	119 aa		13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	MYCBP	Q99417	103 aa	Predicted RBP	13.62	□□□□□ -0.23
VPS8-222	ENST00000475580	NXPH2	O95156	264 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	SERPINA3	P01011	423 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	PRDX2	P32119	198 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	ETV1	P50549	477 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	GTF2A1	P52655	376 aa	Predicted RBP	13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	BPIFB3	P59826	476 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	MRPL28	Q13084	256 aa	Known RBP	13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	BAMBI	Q13145	260 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	PDCD1	Q15116	288 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	LAIR2	Q6ISS4	152 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	CRIP3	Q6Q6R5	217 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	RBMS3	Q6XE24	437 aa	Known RBP	13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	RNF144B	Q7Z419	303 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	ZNF676	Q8N7Q3	588 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	DNAAF1	Q8NEP3	725 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	LHX4	Q969G2	390 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	SLAMF9	Q96A28	289 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	DUX5	Q96PT3	197 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	PDCD1LG2	Q9BQ51	273 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	ONECUT1	Q9UBC0	465 aa		13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.61	□□□□□ -0.23
VPS8-222	ENST00000475580	IGHV1-69D	A0A0B4J2H0	117 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	KNG1	P01042	644 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	IGHV1-69	P01742	117 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	GNAO1	P09471	354 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	ZNF20	P17024	532 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	PRTN3	P24158	256 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	AZGP1	P25311	298 aa	Known RBP	13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	DCK	P27707	260 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	GBX2	P52951	348 aa	Predicted RBP	13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	DLX1	P56177	255 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	PRB3	Q04118	309 aa	Predicted RBP	13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	IL18R1	Q13478	541 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	SLC9A3R2	Q15599	337 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	XAF1	Q6GPH4	301 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	SLC25A26	Q70HW3	274 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	ZNF561	Q8N587	486 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	SETD9	Q8NE22	299 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	OR13C3	Q8NGS6	347 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	RPS4Y2	Q8TD47	263 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	FBLIM1	Q8WUP2	373 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	RGP1	Q92546	391 aa	Predicted RBP	13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	TNFRSF14	Q92956	283 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	CEP19	Q96LK0	163 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	SIRT7	Q9NRC8	400 aa		13.6	□□□□□ -0.23
VPS8-222	ENST00000475580	TMEM89	A2RUT3	159 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	TMEM212	A6NML5	194 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580		H0YAE9	185 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	CLDN34	H7C241	214 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	MT-ND2	P03891	347 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	CCDC159	P0C7I6	412 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	PRKACB	P22694	351 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	CAPG	P40121	348 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	RBP2	P50120	134 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	ATP1B3	P54709	279 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	GABPB1	Q06547	395 aa	Predicted RBP	13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	OR2G6	Q5TZ20	316 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	METAP1D	Q6UB28	335 aa	Predicted RBP	13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	PDZD9	Q8IXQ8	264 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	OR13C9	Q8NGT0	318 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	GATAD2B	Q8WXI9	593 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	OPALIN	Q96PE5	141 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	C19orf12	Q9NSK7	152 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	OR14J1	Q9UGF5	321 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	CLEC2D	Q9UHP7	191 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	DIMT1	Q9UNQ2	313 aa	Known RBP	13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	CAB39	Q9Y376	341 aa	Predicted RBP	13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	HSPE1-MOB4	S4R3N1	261 aa		13.59	□□□□□ -0.23
VPS8-222	ENST00000475580	TRBV23-1	A0A0A0MS06	115 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	RNASEK-C17orf49	H0YIS7	233 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	SLC1A7	O00341	560 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	INMT	O95050	263 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	RNASE1	P07998	156 aa	Known RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	NPBWR2	P48146	333 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	POU3F4	P49335	361 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms