RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZBTB25P24278 435 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 CHATP28329 748 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 HAAOP46952 286 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 NPY4RP50391 375 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 GUSBP1Q15486 140 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 Q6ZT83 130 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 CCDC36Q8IYA8 594 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 ADAD2Q8NCV1 583 aaKnown RBP13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 HDHD3Q9BSH5 251 aaPredicted RBP13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 PPA2Q9H2U2 334 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 FN3KRPQ9HA64 309 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 ZNF581Q9P0T4 197 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 AK3Q9UIJ7 227 aa13.23□□□□□ -0.29
RPUSD3-215ENST00000475470 ANKRD30BLA7E2S9 258 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 AHRRA9YTQ3 701 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 TPOP07202 933 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 VAMP1P23763 118 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 SSTR2P30874 369 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 MRPL49Q13405 166 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 ZNF585AQ6P3V2 769 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 RFPL4BQ6ZWI9 263 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 OR10AD1Q8NGE0 317 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 HPSE2Q8WWQ2 592 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 SCGB3A2Q96PL1 93 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 CMSS1Q9BQ75 279 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 COL25A1Q9BXS0 654 aaPredicted RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 C9orf170A2RU37 121 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 ZNF732B4DXR9 585 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 CNOT4O95628 575 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 IL32P24001 234 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 KIR2DL2P43627 348 aaPredicted RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 RBM11P57052 281 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 TAS2R31P59538 309 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 ACSF3Q4G176 576 aaPredicted RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 OR2A2Q6IF42 318 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 ASB13Q8WXK3 278 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 SULT4A1Q9BR01 284 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
RPUSD3-215ENST00000475470 RGS11O94810 467 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 IL2RAP01589 272 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 ZNF14P17017 642 aaPredicted RBP13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 NPBWR2P48146 333 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 ARPC4P59998 168 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 LIN54Q6MZP7 749 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 VWA1Q6PCB0 445 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 OR5A2Q8NGI9 324 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 PHB2Q99623 299 aa13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 FGF23Q9GZV9 251 aaPredicted RBP13.21□□□□□ -0.29
RPUSD3-215ENST00000475470 PLSCR5A0PG75 271 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 CELA3BP08861 270 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 IDH3GP51553 393 aaPredicted RBP13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 GABRA6Q16445 453 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 SLAMF9Q96A28 289 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 CDH20Q9HBT6 801 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 GPR132Q9UNW8 380 aa13.21□□□□□ -0.3
RPUSD3-215ENST00000475470 IGKV1D-8A0A087WSZ0 117 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 PDCD6O75340 191 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 NFYAP23511 347 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 PER3P56645 1201 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 DHODHQ02127 395 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 PDCD1Q15116 288 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 SPATA46Q5T0L3 261 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 LHFPL1Q86WI0 220 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 SAXO1Q8IYX7 474 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 MITD1Q8WV92 249 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 TMPRSS13Q9BYE2 586 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 CEACAM18A8MTB9 384 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 PROB1E7EW31 1015 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 SNAPC5O75971 98 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 OR7C1O76099 320 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 BCL3P20749 454 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 DTYMKP23919 212 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 FPR2P25090 351 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 HOXC12P31275 282 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 FOXF2Q12947 444 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 GRK1Q15835 563 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 TMEM128Q5BJH2 165 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 LY6G6FQ5SQ64 297 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 Q6ZS92 163 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 MKXQ8IYA7 352 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 OR5M8Q8NGP6 311 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 OR5P3Q8WZ94 311 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms