RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SPRY1O43609 319 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-207ENST00000473212 ACAA1P09110 424 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-207ENST00000473212 OR5H8P0DN80 308 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 PTAFRP25105 342 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 PIGPP57054 158 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 HGFACQ04756 655 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 CHAF1BQ13112 559 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 EIF3IQ13347 325 aaKnown RBP18.41■□□□□ 0.54
COL18A1-207ENST00000473212 MIDNQ504T8 468 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 SLC22A8Q8TCC7 542 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 NABP1Q96AH0 204 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 NELFAQ9H3P2 528 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 HDGFL3Q9Y3E1 203 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 KPTNQ9Y664 436 aa18.41■□□□□ 0.54
COL18A1-207ENST00000473212 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 PRSS44E7EML9 344 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 PATE4P0C8F1 98 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 ACKR3P25106 362 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 OPRM1P35372 400 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 UBAC2Q8NBM4 344 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 SLC25A43Q8WUT9 341 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-207ENST00000473212 HIST1H2BAQ96A08 127 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 Q96M66 194 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 CA11O75493 328 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 MBPP02686 304 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-207ENST00000473212 CBR1P16152 277 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 SLC35A1P78382 337 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 ZNF616Q08AN1 781 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 PPA1Q15181 289 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 RTL6Q6ICC9 239 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 FBXO17Q96EF6 278 aa18.4■□□□□ 0.54
COL18A1-207ENST00000473212 NAA11Q9BSU3 229 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-207ENST00000473212 FAM212BQ9NTI7 297 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-207ENST00000473212 SNRNP70P08621 437 aaKnown RBP18.39■□□□□ 0.53
COL18A1-207ENST00000473212 TGIF1Q15583 401 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 TAF9Q16594 264 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 RAET1LQ5VY80 246 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 EGLN1Q9GZT9 426 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 STARD10Q9Y365 291 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 FAM221AA4D161 298 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 C1orf196B1AJZ1 125 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 LINC01387J3KSC0 135 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 DIRAS3O95661 229 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 SNCAP37840 140 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 FHITP49789 147 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 H3F3AP84243 136 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF239Q16600 458 aaKnown RBP18.39■□□□□ 0.53
COL18A1-207ENST00000473212 PCED1AQ9H1Q7 454 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 PLEKHA2Q9HB19 425 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 WFDC1Q9HC57 220 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 PLEK2Q9NYT0 353 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 AK3Q9UIJ7 227 aa18.39■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF850A8MQ14 1090 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 M0R135 149 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 XRCC2O43543 280 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 GLAP06280 429 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 OR5AC1P0C628 307 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF133P52736 654 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-207ENST00000473212 MTCP1P56278 107 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 S100A12P80511 92 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 AWAT1Q58HT5 328 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 TSPO2Q5TGU0 170 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 BATF2Q8N1L9 274 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 LILRB1Q8NHL6 650 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF799Q96GE5 643 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 C20orf24Q9BUV8 137 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 DECR2Q9NUI1 292 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 LOC102725191A0A1B0GVB3 256 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ZNHIT1O43257 154 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ZNF44P15621 663 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 NTF4P34130 210 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 PCOLCEQ15113 449 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 PDCD1Q15116 288 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.38■□□□□ 0.53
COL18A1-207ENST00000473212 PPP1R3BQ86XI6 285 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 ISOC2Q96AB3 205 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 IP6K3Q96PC2 410 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 PROK2Q9HC23 129 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 NXT1Q9UKK6 140 aaKnown RBP18.38■□□□□ 0.53
COL18A1-207ENST00000473212 EDARQ9UNE0 448 aa18.38■□□□□ 0.53
COL18A1-207ENST00000473212 E5RGE8 158 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 HOXB1P14653 301 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-207ENST00000473212 DAOP14920 347 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 PAX6P26367 422 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 FXYD4P59646 89 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 GUK1Q16774 197 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 RBMS3Q6XE24 437 aaKnown RBP18.37■□□□□ 0.53
COL18A1-207ENST00000473212 LYZL2Q7Z4W2 148 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 RGCCQ9H4X1 137 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 KCNIP3Q9Y2W7 256 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 NSG2Q9Y328 171 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 IGKV1-27A0A075B6S5 117 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 C1QL1O75973 258 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 EIF1P41567 113 aaKnown RBP18.37■□□□□ 0.53
COL18A1-207ENST00000473212 TMEM187Q14656 261 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 NANPQ8TBE9 248 aa18.37■□□□□ 0.53
COL18A1-207ENST00000473212 EIF5A2Q9GZV4 153 aaKnown RBP18.37■□□□□ 0.53
COL18A1-207ENST00000473212 FAM230AA0A1W2PPH8 454 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 C7orf77A4D0Y5 90 aa18.36■□□□□ 0.53
COL18A1-207ENST00000473212 TNFSF11O14788 317 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms