RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SERPINI1Q99574 410 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 PHB2Q99623 299 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 ARHGDIGQ99819 225 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 GGACTQ9BVM4 153 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 RAB34Q9BZG1 259 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 ARL6Q9H0F7 186 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 DEFB129Q9H1M3 183 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 MIXL1Q9H2W2 232 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 SPANXA1Q9NS26 97 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 GHRLQ9UBU3 117 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 GLS2Q9UI32 602 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 DKKL1Q9UK85 242 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 UBQLN1Q9UMX0 589 aaKnown RBP2.41□□□□□ -2.02
CD46-213ENST00000471987 COPS3Q9UNS2 423 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 KCNIP3Q9Y2W7 256 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 HSPB11Q9Y547 144 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 ZNF609O15014 1411 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 CLIP1P30622 1438 aa2.41□□□□□ -2.02
CD46-213ENST00000471987 WRNQ14191 1432 aaPredicted RBP eCLIP2.41□□□□□ -2.02
CD46-213ENST00000471987 WNK3Q9BYP7 1800 aa2.4□□□□□ -2.02
CD46-213ENST00000471987 MAGI1Q96QZ7 1491 aaPredicted RBP2.4□□□□□ -2.02
CD46-213ENST00000471987 IFT140Q96RY7 1462 aa2.4□□□□□ -2.02
CD46-213ENST00000471987 NESP48681 1621 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 LRP5LA4QPB2 252 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR6C6A6NF89 314 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 LRRC30A6NM36 301 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 EVPLLA8MZ36 301 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 F5H768 121 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 M0QYV0 167 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 KCNK1O00180 336 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 AZIN1O14977 448 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 FGF16O43320 207 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RAD1O60671 282 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 DCTN3O75935 186 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR2J2O76002 312 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 CNIH1O95406 144 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 TTC4O95801 387 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 IGHG4P01861 327 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 CD74P04233 296 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 P04436 131 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 BCHEP06276 602 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RHOCP08134 193 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR10J4P0C629 311 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 HIST1H1EP10412 219 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 FOLR1P15328 257 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 AKR1C4P17516 323 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PGCP20142 388 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 SERPINA2P20848 420 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RPL13AP40429 203 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 RPS9P46781 194 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 SERPINB10P48595 397 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RBP2P50120 134 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OSTNP61366 133 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 GTF2BQ00403 316 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 HMGCS1Q01581 520 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 ACVR1Q04771 509 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 SRYQ05066 204 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 MOBPQ13875 183 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PRPSAP1Q14558 356 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 MAD2L1BPQ15013 274 aaPredicted RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 TSNQ15631 228 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 KCNJ8Q15842 424 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 ATP6AP1Q15904 470 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 ZNF77Q15935 545 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 ATP6V1FQ16864 119 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RPEL1Q2QD12 228 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 SMIM21Q3B7S5 101 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 SPIN4Q56A73 249 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RNASE10Q5GAN6 216 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 SYT6Q5T7P8 510 aaPredicted RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 OR8G2PQ6IF36 304 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 LPCAT3Q6P1A2 487 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 SPNS3Q6ZMD2 512 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 C19orf35Q6ZS72 473 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 TCF24Q7RTU0 167 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OLIG3Q7RTU3 272 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 NET1Q7Z628 596 aaPredicted RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 LRRC28Q86X40 367 aaPredicted RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 RNF182Q8N6D2 247 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR4F6Q8NGB9 312 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR10G3Q8NGC4 313 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR56A4Q8NGH8 313 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR13D1Q8NGV5 346 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 OR51F2Q8NH61 342 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 CD200R1Q8TD46 325 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PYROXD1Q8WU10 500 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 BAALCQ8WXS3 180 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RGP1Q92546 391 aaPredicted RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 STMN2Q93045 179 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 TESCQ96BS2 214 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 FLYWCH2Q96CP2 140 aaKnown RBP2.4□□□□□ -2.03
CD46-213ENST00000471987 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 MED8Q96G25 268 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PPP3R2Q96LZ3 170 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PLA2G2FQ9BZM2 168 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 COMMD4Q9H0A8 199 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 PPA2Q9H2U2 334 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 TXNIPQ9H3M7 391 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 RHOJQ9H4E5 214 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms