RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MDH2P40926 338 aaKnown RBP7.58□□□□□ -1.2
SF3A1-206ENST00000471037 MTNR1BP49286 362 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 GSK3AP49840 483 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 VBP1P61758 197 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 NCS1P62166 190 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 LSM3P62310 102 aaKnown RBP7.58□□□□□ -1.2
SF3A1-206ENST00000471037 BTG1P62324 171 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 PAX2Q02962 417 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 PAX8Q06710 450 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 RIPPLY1Q0D2K3 151 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 PSG7Q13046 419 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 INSL4Q14641 139 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 ZMYND11Q15326 602 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 SLC9A3R2Q15599 337 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 FOXB2Q5VYV0 432 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 SERPINA12Q8IW75 414 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 CSNK2A3Q8NEV1 391 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 OR5D14Q8NGL3 314 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 PP6455Q8WZ26 134 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 C12orf43Q96C57 262 aaKnown RBP7.58□□□□□ -1.2
SF3A1-206ENST00000471037 POFUT1Q9H488 388 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 NOX4Q9NPH5 578 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 IL19Q9UHD0 177 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 FOXJ3Q9UPW0 622 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 MMP24Q9Y5R2 645 aa7.58□□□□□ -1.2
SF3A1-206ENST00000471037 ZNF816-ZNF321PA0A0X1KG74 233 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 CD300LBA8K4G0 201 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 IQCF6A8MYZ5 107 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 PIN1P1O15428 100 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 PLATP00750 562 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 IL1AP01583 271 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 SRMP19623 302 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 TNFSF4P23510 183 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 ACKR3P25106 362 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 GNALP38405 381 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 PPP3R1P63098 170 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 HNRNPA0Q13151 305 aaKnown RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 HLXQ14774 488 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 ESCO2Q56NI9 601 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 FAM27D1Q5T7N8 215 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 Q6ZR03 302 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 UTS2BQ765I0 119 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 KRT74Q7RTS7 529 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 OR56B2PQ8NGI1 322 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 DACT3Q96B18 629 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 UPRTQ96BW1 309 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 FGGYQ96C11 551 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 HAVCR1Q96D42 359 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 CMBLQ96DG6 245 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 ADAT3Q96EY9 351 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 TECTBQ96PL2 329 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 CHST5Q9GZS9 411 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 MS4A7Q9GZW8 240 aaPredicted RBP7.57□□□□□ -1.2
SF3A1-206ENST00000471037 ZCCHC4Q9H5U6 513 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 NEK6Q9HC98 313 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 TCF7L1Q9HCS4 588 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 ABCB9Q9NP78 766 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 SNTG1Q9NSN8 517 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 OR5V1Q9UGF6 321 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 PPP1R3CQ9UQK1 317 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 PIGLQ9Y2B2 252 aa7.57□□□□□ -1.2
SF3A1-206ENST00000471037 A0A0G2JK05 382 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 A0A1B0GUS0 222 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 A0A1W2PPK0 400 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 MEGF11A6BM72 1044 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 ANKRD61A6NGH8 418 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 ANKRD30BLA7E2S9 258 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 CEACAM18A8MTB9 384 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 IFNL4K9M1U5 179 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 PDCD5O14737 125 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 ALX3O95076 343 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 FSTL3O95633 263 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 CST4P01036 141 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 WNT2P09544 360 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 IGHV4-38-2P0DP08 117 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 FAHP16930 419 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 IGFBP3P17936 291 aaPredicted RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 RAB3AP20336 220 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 MDKP21741 143 aaPredicted RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 CD80P33681 288 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 SDC2P34741 201 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 SERPINB10P48595 397 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 PSMD7P51665 324 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 MIDNQ504T8 468 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 CLVS2Q5SYC1 327 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM42Q69YG0 159 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 OR2T2Q6IF00 324 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 ZNF529Q6P280 563 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 C16orf87Q6PH81 154 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 OR2Z1Q8NG97 314 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 OR2V2Q96R30 315 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 PPIL3Q9H2H8 161 aaKnown RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 PRDM13Q9H4Q3 707 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 RNF167Q9H6Y7 350 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms