RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 TMEM234Q8WY98 164 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 NTNG2Q96CW9 530 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 GPR61Q9BZJ8 451 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 PPP1R14DQ9NXH3 145 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 FOXJ2Q9P0K8 574 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 B9D1Q9UPM9 204 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZFHX4Q86UP3 3567 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 NSG1A0A0A6YYJ2 146 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 FTCDNL1E5RQL4 147 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 K7EPK0 472 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 PLPP3O14495 311 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 TCAPO15273 167 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 OR6A2O95222 327 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 SOD3P08294 240 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZNF708P17019 499 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 CRABP1P29762 137 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 FCGR2CP31995 323 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 DNASE1L1P49184 302 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 TMEM33P57088 247 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 UNC119Q13432 240 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 OPN5Q6U736 354 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 CATSPERDQ86XM0 798 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 HIST3H2BBQ8N257 126 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 FAM71E2Q8N5Q1 922 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 TP53TG5Q9Y2B4 290 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 OTOGLQ3ZCN5 2332 aa12.18□□□□□ -0.46
GPC1-208ENST00000469694 CPAMD8Q8IZJ3 1885 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 A0A1W2PNR3 127 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 C9orf172C9J069 976 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 CCL3P10147 92 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 SFTPCP11686 197 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 PI3P19957 117 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 ZNF41P51814 821 aaPredicted RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 KHDC3LQ587J8 217 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 JSRP1Q96MG2 331 aaPredicted RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 ZNF700Q9H0M5 742 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 MED29Q9NX70 200 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 COL27A1Q8IZC6 1860 aaPredicted RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 B4E171 279 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 MPZL1O95297 269 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 OR13C7P0DN81 318 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 KLK2P20151 261 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 SFTPDP35247 375 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 TSPAN7P41732 249 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 RPUSD3Q6P087 351 aaKnown RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
GPC1-208ENST00000469694 CNTD2Q9H8S5 307 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 TCFL5Q9UL49 500 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 MEMO1Q9Y316 297 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 FBXO7Q9Y3I1 522 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 LAMA5O15230 3695 aa12.17□□□□□ -0.46
GPC1-208ENST00000469694 ZNF726A6NNF4 738 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ZNF724A8MTY0 619 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ZNF587BE7ETH6 402 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 XKRYO14609 159 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
GPC1-208ENST00000469694 MT-ATP6P00846 226 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 SPARCP09486 303 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ROM1Q03395 351 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 Q0VFX4 171 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 PPP1R32Q7Z5V6 425 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 OR13C9Q8NGT0 318 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 RNF138Q8WVD3 245 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ST8SIA1Q92185 356 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 EMC6Q9BV81 110 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ARV1Q9H2C2 271 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 LUZP4Q9P127 313 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
GPC1-208ENST00000469694 ARID1AO14497 2285 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
GPC1-208ENST00000469694 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 MS4A18H0YCH9 400 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 SLC16A7O60669 478 aa12.16□□□□□ -0.46
GPC1-208ENST00000469694 SFTPBP07988 381 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms