RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 RAB3AP20336 220 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RAB3BP20337 219 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 AGAP20933 346 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CA6P23280 308 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CFL1P23528 166 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PAX7P23759 505 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ACKR3P25106 362 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 MAPK3P27361 379 aaPredicted RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 BDKRB2P30411 391 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RORCP51449 518 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR10A3P58181 314 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 SELENOVP59797 346 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PPP3R1P63098 170 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 TFF3Q07654 80 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 SRSF1Q07955 248 aaKnown RBP eCLIP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PSG7Q13046 419 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 HNRNPA0Q13151 305 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PRDX4Q13162 271 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CTF1Q16619 201 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 FBXL19-AS1Q494R0 122 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 BEX5Q5H9J7 111 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 NCMAPQ5T1S8 102 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 IDNKQ5T6J7 187 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 HES5Q5TA89 166 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PLCXD3Q63HM9 321 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF66Q6ZN08 573 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 USP43Q70EL4 1123 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 BATF2Q8N1L9 274 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 JAGN1Q8N5M9 183 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 KBTBD8Q8NFY9 601 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR1M1Q8NGA1 313 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR56B2PQ8NGI1 322 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR51A2Q8NGJ7 313 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR5D14Q8NGL3 314 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 OR13C9Q8NGT0 318 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF420Q8TAQ5 688 aaPredicted RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RPS4Y2Q8TD47 263 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 KLF14Q8TD94 323 aaPredicted RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 SSC4DQ8WTU2 575 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PIGTQ969N2 578 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM106AQ96A25 262 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RFT1Q96AA3 541 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 HAVCR1Q96D42 359 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 DACH2Q96NX9 599 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 DERL3Q96Q80 235 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 SPACA5Q96QH8 159 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 GPER1Q99527 375 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 GAL3ST1Q99999 423 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ELOVL1Q9BW60 279 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PAPOLGQ9BWT3 736 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 BCL2L14Q9BZR8 327 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RGCCQ9H4X1 137 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 MOV10Q9HCE1 1003 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM100Q9NV29 134 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CISD1Q9NZ45 108 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 TAAR3PQ9P1P4 343 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 MYEF2Q9P2K5 600 aaKnown RBP3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CKLFQ9UBR5 152 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 KCNN3Q9UGI6 736 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ATPIF1Q9UII2 106 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ING4Q9UNL4 249 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC7A11Q9UPY5 501 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 RHBDD3Q9Y3P4 386 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 CMAHPQ9Y471 501 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 V9GYS6 101 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ATMQ13315 3056 aa3.47□□□□□ -1.85
TMEM39A-204ENST00000468545 ITPR1Q14643 2758 aa3.46□□□□□ -1.85
TMEM39A-204ENST00000468545 PRRC2CQ9Y520 2896 aaKnown RBP3.46□□□□□ -1.85
TMEM39A-204ENST00000468545 ZZEF1O43149 2961 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 PCNX1Q96RV3 2341 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 A0A0B4J203 849 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF816-ZNF321PA0A0X1KG74 233 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF732B4DXR9 585 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 E7EQL1 145 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC22A1O15245 554 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GMDSO60547 372 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SC5DO75845 299 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 IGLV3-1P01715 115 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RAF1P04049 648 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 UCHL1P09936 223 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR4A8P0C604 315 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CALCBP10092 127 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SELEP16581 610 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CCL1P22362 96 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 FGF9P31371 208 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SOX6P35712 828 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GLRXP35754 106 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 DDOSTP39656 456 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ALDH3B1P43353 468 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 POU3F4P49335 361 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GPM6AP51674 278 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ATP1B3P54709 279 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 MTCP1P56278 107 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CLDN12P56749 244 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 KLF3P57682 345 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM3BP58499 235 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GMFBP60983 142 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RPL15P61313 204 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms