RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CHST5Q9GZS9 411 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 PRDM13Q9H4Q3 707 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 HES4Q9HCC6 221 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 AMBNQ9NP70 447 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 INPP5EQ9NRR6 644 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 GPR173Q9NS66 373 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 RASL12Q9NYN1 266 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 NLKQ9UBE8 527 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 RPUSD1Q9UJJ7 312 aaKnown RBP9.21□□□□□ -0.94
COL4A6-205ENST00000468338 X6R8D5 127 aa9.21□□□□□ -0.94
COL4A6-205ENST00000468338 IGKV1D-17A0A075B6S4 117 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 LOC107986453A0A1B0GWG9 222 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 A6NIN4 97 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 OR4C45A6NMZ5 311 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 OR2AT4A6NND4 320 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SYNGR1O43759 233 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 FADS2O95864 444 aaKnown RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 AMY2AP04746 511 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 PF4V1P10720 104 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 PSG2P11465 335 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 GLRA1P23415 457 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 HAAOP46952 286 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SCAND1P57086 179 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 BPIFB3P59826 476 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 FGF12P61328 243 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ERVK11-1P61568 191 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ACTA2P62736 377 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ACTG2P63267 376 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ADARB1P78563 741 aaKnown RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 RCN1Q15293 331 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 DGUOKQ16854 277 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ODF4Q2M2E3 257 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ZNF691Q5VV52 312 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 TMEM244Q5VVB8 128 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 LHFPL3Q86UP9 236 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 BCL6BQ8N143 479 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 Q8N1Y9 231 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 BPIFB2Q8N4F0 458 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 PNLDC1Q8NA58 520 aaKnown RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 OR5T2Q8NGG2 359 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 OR52I1Q8NGK6 324 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 FAM216AQ8WUB2 273 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 C22orf15Q8WYQ4 148 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SDSLQ96GA7 329 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ZNF48Q96MX3 618 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 TBX15Q96SF7 602 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 NRIP2Q9BQI9 281 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 PKIBQ9C010 78 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SIRPDQ9H106 197 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 FGF20Q9NP95 211 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ESM1Q9NQ30 184 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 SNTG1Q9NSN8 517 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 ZNF281Q9Y2X9 895 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 RPL36Q9Y3U8 105 aaKnown RBP9.2□□□□□ -0.94
COL4A6-205ENST00000468338 MAB21L2Q9Y586 359 aa9.2□□□□□ -0.94
COL4A6-205ENST00000468338 IGKV1-27A0A075B6S5 117 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 J3QLW9 94 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 NDUFB3O43676 98 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 GATBO75879 557 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 LIMS3P0CW19 117 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 LIMS4P0CW20 117 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 SELLP14151 372 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ZNF19P17023 458 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 PEX2P28328 305 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 CAV3P56539 151 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 IL13RA1P78552 427 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 IL24Q13007 206 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 MRPL28Q13084 256 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ALKBH1Q13686 389 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 LRRC36Q1X8D7 754 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 KLHL22Q53GT1 634 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 OGFRL1Q5TC84 451 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 TTC23Q5W5X9 447 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ACP7Q6ZNF0 438 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 UTS2BQ765I0 119 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 DNAAF1Q8NEP3 725 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ZNF555Q8NEP9 628 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 PP6455Q8WZ26 134 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 TMIGD2Q96BF3 282 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ADAT3Q96EY9 351 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 MRPL48Q96GC5 212 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 MED30Q96HR3 178 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 C4orf36Q96KX1 117 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 C1orf147Q96MC9 270 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 WDFY2Q96P53 400 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 MYCBPQ99417 103 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 DCTN5Q9BTE1 182 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ADI1Q9BV57 179 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 CNTD2Q9H8S5 307 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 ISG20L2Q9H9L3 353 aaKnown RBP9.19□□□□□ -0.94
COL4A6-205ENST00000468338 POLDIP2Q9Y2S7 368 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 KPTNQ9Y664 436 aa9.19□□□□□ -0.94
COL4A6-205ENST00000468338 TRAV40A0A0B4J280 105 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms