RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 NELFAQ9H3P2 528 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
PRPF38B-204ENST00000467302 MEX3AA1L020 520 aaKnown RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 FAM157AC9JC47 383 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 F5H5K5 113 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 G3V3Y1 287 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 MSTNO14793 375 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 MED6O75586 246 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 CST4P01036 141 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 GAPDHP04406 335 aaKnown RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 NR2C1P13056 603 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 IAH1Q2TAA2 248 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF468Q5VIY5 522 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 OR5H15A6NDH6 313 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 CRYM-AS1A6NIL9 109 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF98A6NK75 572 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 DEDDO75618 318 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 CTSDP07339 412 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 NFYBP25208 207 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 RBMXP38159 391 aaKnown RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 Q0VFX4 171 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 RAET1LQ5VY80 246 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 C6orf201Q7Z4U5 140 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 Q96M66 194 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 PARP11Q9NR21 331 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 ZNF701Q9NV72 531 aaPredicted RBP12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 DKKL1Q9UK85 242 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 PIGLQ9Y2B2 252 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 EML6Q6ZMW3 1958 aa12.84□□□□□ -0.35
PRPF38B-204ENST00000467302 SDK2Q58EX2 2172 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 C9JQL5 133 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 K7EPK0 472 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 ZIC3O60481 467 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 CBR3O75828 277 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 SERPINA5P05154 406 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 SERPINA7P05543 415 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 SFTA3P0C7M3 94 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 NME2P22392 152 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 RPUSD3Q6P087 351 aaKnown RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 SULF2Q8IWU5 870 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 ESRP2Q9H6T0 727 aaKnown RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 WDFY3Q8IZQ1 3526 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 C21orf140B9A014 251 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 JTBO76095 146 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 P04436 131 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 CRYBA1P05813 215 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 PDZK1IP1Q13113 114 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 PIGTQ969N2 578 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 S100A13Q99584 98 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 PIGQQ9BRB3 760 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 GPR87Q9BY21 358 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 PLEKHJ1Q9NW61 149 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 P4HTMQ9NXG6 502 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 FBXL17Q9UF56 701 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 AMDHD2Q9Y303 409 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
PRPF38B-204ENST00000467302 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 PQLC2LA1A4F0 135 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 PCP4L1A6NKN8 68 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 FBXO24O75426 580 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 F2RL1P55085 397 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 CTAG1AP78358 180 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 GGNBP1Q5YKI7 109 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 GALNTL5Q7Z4T8 443 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 SKA3Q8IX90 412 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 TMEM123Q8N131 208 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 CCDC54Q8NEL0 328 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 ZNF385AQ96PM9 386 aaKnown RBP12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 PRRX2Q99811 253 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 LIME1Q9H400 295 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 ELL3Q9HB65 397 aaPredicted RBP12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 EDARQ9UNE0 448 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 MYO7BQ6PIF6 2116 aa12.82□□□□□ -0.36
PRPF38B-204ENST00000467302 M0R135 149 aa12.81□□□□□ -0.36
PRPF38B-204ENST00000467302 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
PRPF38B-204ENST00000467302 DBHP09172 617 aa12.81□□□□□ -0.36
PRPF38B-204ENST00000467302 SPP1P10451 314 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms