RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 INMTO95050 263 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 CYB5AP00167 134 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 EDDM3BP56851 147 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 PROK1P58294 105 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 PDLIM3Q53GG5 364 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-206ENST00000466591 GDPD3Q7L5L3 318 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 AMIGO2Q86SJ2 522 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 CD177Q8N6Q3 437 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 DTX3Q8N9I9 347 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 OR2T6Q8NHC8 308 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 TNFRSF14Q92956 283 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 RFKQ969G6 155 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 NKX3-1Q99801 234 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-206ENST00000466591 C16orf95Q9H693 158 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 IMPAD1Q9NX62 359 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 SLC22A13Q9Y226 551 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 V9GYS6 101 aa14.31□□□□□ -0.12
COL7A1-206ENST00000466591 PQLC2LA1A4F0 135 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 DHRS7CA6NNS2 312 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 ATP5HO75947 161 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 APOL3O95236 402 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 IGLV3-1P01715 115 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 CSF1P09603 554 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 OR2T7P0C7T2 308 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 CNN3Q15417 329 aaKnown RBP14.3□□□□□ -0.12
COL7A1-206ENST00000466591 ARSJQ5FYB0 599 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-206ENST00000466591 AADACL4Q5VUY2 407 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 C12orf73Q69YU5 71 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 TMEM200BQ69YZ2 307 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 SLC35E4Q6ICL7 350 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 ZNF782Q6ZMW2 699 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-206ENST00000466591 ANGPTL5Q86XS5 388 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 OR14K1Q8NGZ2 314 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 FAM110DQ8TAY7 271 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-206ENST00000466591 RORBQ92753 470 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 BORCS8Q96FH0 119 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 CIB1Q99828 191 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 MRM2Q9UI43 246 aaKnown RBP14.3□□□□□ -0.12
COL7A1-206ENST00000466591 GNG8Q9UK08 70 aa14.3□□□□□ -0.12
COL7A1-206ENST00000466591 METTL15A6NJ78 407 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 PEX14O75381 377 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 TSPAN9O75954 239 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 TK1P04183 234 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 CCL3L1P16619 93 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 HTR1FP30939 366 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 CDC42P60953 191 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 DYNC1I2Q13409 638 aaKnown RBP14.29□□□□□ -0.12
COL7A1-206ENST00000466591 PLA1AQ53H76 456 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 KDM4DQ6B0I6 523 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 ASPHD2Q6ICH7 369 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 KRT74Q7RTS7 529 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 OR13D1Q8NGV5 346 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 CEP19Q96LK0 163 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 NRIP2Q9BQI9 281 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 PKIBQ9C010 78 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 NPFFR1Q9GZQ6 430 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 GABARAPL1Q9H0R8 117 aa14.29□□□□□ -0.12
COL7A1-206ENST00000466591 A0A1W2PQL4 384 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-206ENST00000466591 NOS1APO75052 506 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-206ENST00000466591 SRSF10O75494 262 aaKnown RBP14.28□□□□□ -0.12
COL7A1-206ENST00000466591 ARG1P05089 322 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 CHRM2P08172 466 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 EPHA2P29317 976 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 FUT6P51993 359 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 KRTAP10-3P60369 221 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 COL10A1Q03692 680 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 IL24Q13007 206 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 EDDM3AQ14507 147 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 C11orf88Q6PI97 169 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 CCDC54Q8NEL0 328 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 EMG1Q92979 244 aaKnown RBP14.28□□□□□ -0.12
COL7A1-206ENST00000466591 GLS2Q9UI32 602 aa14.28□□□□□ -0.12
COL7A1-206ENST00000466591 A0A1B0GTI1 187 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 SAC3D1A6NKF1 404 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 H3BUI4 141 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 UBCP0CG48 685 aaKnown RBP14.27□□□□□ -0.13
COL7A1-206ENST00000466591 ZNF20P17024 532 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 BMXP51813 675 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 BNIP1Q12981 228 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 FAM189A2Q15884 450 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 OCLNQ16625 522 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 TMEM42Q69YG0 159 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 CALHM1Q8IU99 346 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 EGFL6Q8IUX8 553 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 OR8J1Q8NGP2 316 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 C17orf50Q8WW18 174 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 SLAMF9Q96A28 289 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 FOXRED1Q96CU9 486 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-206ENST00000466591 FBLN5Q9UBX5 448 aa14.27□□□□□ -0.13
COL7A1-206ENST00000466591 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
COL7A1-206ENST00000466591 SULT1C4O75897 302 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 TSPAN15O95858 294 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 VSIG10L2P0DP72 767 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 GABRR1P24046 479 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 PAX6P26367 422 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 POU3F4P49335 361 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 ZNF273Q14593 569 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 HERPUD1Q15011 391 aa14.26□□□□□ -0.13
COL7A1-206ENST00000466591 SLC25A26Q70HW3 274 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms