RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RPUSD3Q6P087 351 aaKnown RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 SLC22A25Q6T423 547 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 C6orf15Q6UXA7 325 aaPredicted RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 GGNQ86UU5 652 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 ARRDC1-AS1Q9H2J1 176 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 GP1BAP07359 652 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 NME2P22392 152 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 PIGPP57054 158 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 OR2A2Q6IF42 318 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 SSC4DQ8WTU2 575 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 MARC2Q969Z3 335 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 RAB18Q9NP72 206 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 FAM74A7A6NL05 159 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 C3orf80F5H4A9 247 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 GPR31O00270 319 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 DIRAS3O95661 229 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 HLA-GP17693 338 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 CTSSP25774 331 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 NOVA1P51513 510 aaKnown RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 B3GALT5-AS1P59052 145 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 PLEKHN1Q494U1 663 aaPredicted RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 FAM74A3Q4VXF1 159 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 PABPC1L2AQ5JQF8 200 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 NUDT16L1Q9BRJ7 211 aaKnown RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 MED9Q9NWA0 146 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 GHRLQ9UBU3 117 aa14.22□□□□□ -0.13
SLX4-202ENST00000466154 NOSIPQ9Y314 301 aaKnown RBP14.22□□□□□ -0.13
SLX4-202ENST00000466154 YKT6O15498 198 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 ITGA3P26006 1051 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 DUSP1P28562 367 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 ZNF169Q14929 603 aaPredicted RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 CNN3Q15417 329 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 ZNF239Q16600 458 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 RPL7L1Q6DKI1 246 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 FNDC9Q8TBE3 224 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 MRPL24Q96A35 216 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 C2orf50Q96LR7 162 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 Q96M66 194 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 PAPOLGQ9BWT3 736 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 ANXA10Q9UJ72 324 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 SHANK1Q9Y566 2161 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 LRRC3CA6NJW4 275 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 ZNF587BE7ETH6 402 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 MRPL33O75394 65 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 HLA-HP01893 362 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 CD79AP11912 226 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 TRA2AQ13595 282 aaKnown RBP eCLIP14.21□□□□□ -0.13
SLX4-202ENST00000466154 MEX3BQ6ZN04 569 aaKnown RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 SLC25A26Q70HW3 274 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 DEFB123Q8N688 67 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 NEK7Q8TDX7 302 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 GPHA2Q96T91 129 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 ZNF629Q9UEG4 869 aaPredicted RBP14.21□□□□□ -0.13
SLX4-202ENST00000466154 SLC7A11Q9UPY5 501 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 FAM96BQ9Y3D0 163 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 TIMM10BQ9Y5J6 103 aa14.21□□□□□ -0.13
SLX4-202ENST00000466154 XRCC2O43543 280 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 FARS2O95363 451 aaKnown RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 OR2H1Q9GZK4 316 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 LIME1Q9H400 295 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 BARX1Q9HBU1 254 aaPredicted RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 TMEM265A0A087WTH1 108 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 IGKV1-12A0A0C4DH73 117 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 FIGNL2A6NMB9 653 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 ZNF716A6NP11 495 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 IGKV1D-12P01611 117 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 FCGR2CP31995 323 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 OTX1P32242 354 aaPredicted RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 FOXG1P55316 489 aaPredicted RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 SRSF4Q08170 494 aaKnown RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 LHFPL1Q86WI0 220 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 MARS2Q96GW9 593 aaKnown RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 WNT5BQ9H1J7 359 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 PRO3102Q9H379 93 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 SH2D2AQ9NP31 389 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 C1orf123Q9NWV4 160 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 CCDC163A0A0D9SF12 145 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 A0A1B0GV50 99 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 F8W036 122 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 CRYGSP22914 178 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 ID4P47928 161 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 BLOC1S1P78537 153 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 PRSS54Q6PEW0 395 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 CCDC36Q8IYA8 594 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 OR10AD1Q8NGE0 317 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 OR11L1Q8NGX0 322 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 INTS12Q96CB8 462 aaKnown RBP14.2□□□□□ -0.14
SLX4-202ENST00000466154 GPR35Q9HC97 309 aa14.2□□□□□ -0.14
SLX4-202ENST00000466154 LRP3O75074 770 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 IFNA21P01568 189 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 IGLV3-1P01715 115 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 NPBWR2P48146 333 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 RBM39Q14498 530 aaKnown RBP14.19□□□□□ -0.14
SLX4-202ENST00000466154 SMCO1Q147U7 214 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 GUCD1Q96NT3 240 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 SIGLEC12Q96PQ1 595 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 MEMO1Q9Y316 297 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 DOCK10Q96BY6 2186 aa14.19□□□□□ -0.14
SLX4-202ENST00000466154 NCKAP5O14513 1909 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms