RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GNB2P62879 340 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 TBCEQ15813 527 aaPredicted RBP16.9■□□□□ 0.3
SKA3-205ENST00000465471 Q499Y3 187 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4L9Q6RFH8 374 aaPredicted RBP16.9■□□□□ 0.3
SKA3-205ENST00000465471 ZNF788Q6ZQV5 615 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 RNF144BQ7Z419 303 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 SNTG1Q9NSN8 517 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 DUX4Q9UBX2 424 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 LPAR3Q9UBY5 353 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 CLN8Q9UBY8 286 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 CDC42EP3Q9UKI2 254 aa16.9■□□□□ 0.3
SKA3-205ENST00000465471 IGKV1D-17A0A075B6S4 117 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 A0A0G2JMP0 313 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 A0A0X1KG70 313 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 PNMA8CA0A1B0GUJ8 204 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 OR2AT4A6NND4 320 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 TMPRSS2O15393 492 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 MRPS14O60783 128 aaKnown RBP16.89■□□□□ 0.29
SKA3-205ENST00000465471 GPX5O75715 221 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 PSG2P11465 335 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 IGFBP3P17936 291 aaPredicted RBP16.89■□□□□ 0.29
SKA3-205ENST00000465471 GPR50Q13585 617 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 MED22Q15528 200 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 SMIM21Q3B7S5 101 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 SLC25A26Q70HW3 274 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 OR4M2Q8NGB6 313 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 OR5T2Q8NGG2 359 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 OR51A2Q8NGJ7 313 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 GAFA1Q96PS6 74 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 CCL13Q99616 98 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 TMPRSS13Q9BYE2 586 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 YTHDF1Q9BYJ9 559 aaKnown RBP16.89■□□□□ 0.29
SKA3-205ENST00000465471 NEK6Q9HC98 313 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 ISYNA1Q9NPH2 558 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 MMP26Q9NRE1 261 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 TAS2R4Q9NYW5 299 aa16.89■□□□□ 0.29
SKA3-205ENST00000465471 F8VVB4 439 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 F8VWA3 439 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 J3QLI3 93 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 FSTP19883 344 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 RAB3AP20336 220 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 PDZK1IP1Q13113 114 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 C11orf91Q3C1V1 193 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 DCAF12L2Q5VW00 463 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 SLC36A1Q7Z2H8 476 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 FAM216BQ8N7L0 139 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 SLAMF9Q96A28 289 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 CEP19Q96LK0 163 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 OR14A2Q96R54 314 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 CCDC90BQ9GZT6 254 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 OR5V1Q9UGF6 321 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 INSIG2Q9Y5U4 225 aa16.88■□□□□ 0.29
SKA3-205ENST00000465471 C22orf46C9J442 243 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 DVL1O14640 695 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 SIGLEC5O15389 551 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 NXPH2O95156 264 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 PLATP00750 562 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 EEF1B2P24534 225 aaKnown RBP16.87■□□□□ 0.29
SKA3-205ENST00000465471 MAP2K4P45985 399 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 RIPPLY3P57055 190 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 ZP1P60852 638 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 TPBGQ13641 420 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 KISS1Q15726 138 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 C1orf229Q6ZS94 237 aaPredicted RBP16.87■□□□□ 0.29
SKA3-205ENST00000465471 MKXQ8IYA7 352 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 ORAI1Q96D31 301 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 SDSLQ96GA7 329 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 DERL3Q96Q80 235 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 SHARPINQ9H0F6 387 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 MXRA5Q9NR99 2828 aa16.87■□□□□ 0.29
SKA3-205ENST00000465471 IGHV2-70DA0A0C4DH43 119 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 IGKV1-12A0A0C4DH73 117 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 NKX6-3A6NJ46 265 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 ZNF879B4DU55 563 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 SC5DO75845 299 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 AVPP01185 164 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 IGKV1D-12P01611 117 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 TFF1P04155 84 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 ALDOBP05062 364 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 OCMP0CE72 109 aaPredicted RBP16.86■□□□□ 0.29
SKA3-205ENST00000465471 POU3F4P49335 361 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 IL13RA1P78552 427 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 MLLT11Q13015 90 aaPredicted RBP16.86■□□□□ 0.29
SKA3-205ENST00000465471 CHRFAM7AQ494W8 412 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 FAHD2BQ6P2I3 314 aaPredicted RBP16.86■□□□□ 0.29
SKA3-205ENST00000465471 Q8IYB0 196 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 SAXO1Q8IYX7 474 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 BATF2Q8N1L9 274 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 MS4A15Q8N5U1 240 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 RAB40AQ8WXH6 277 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 THRSPQ92748 146 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 RFT1Q96AA3 541 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 FAHD2AQ96GK7 314 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 ACOT13Q9NPJ3 140 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 OPN4Q9UHM6 478 aa16.86■□□□□ 0.29
SKA3-205ENST00000465471 TRAV8-7A0A075B6U6 113 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 PIN1P1O15428 100 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 SPRY1O43609 319 aaPredicted RBP16.85■□□□□ 0.29
SKA3-205ENST00000465471 KDM4BO94953 1096 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms