RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ACP7Q6ZNF0 438 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 SLC25A26Q70HW3 274 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 SLC36A1Q7Z2H8 476 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 MKXQ8IYA7 352 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 ANGPTL6Q8NI99 470 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 SLAMF9Q96A28 289 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 MMP26Q9NRE1 261 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 OR5V1Q9UGF6 321 aa12.08□□□□□ -0.48
SQSTM1-205ENST00000464493 J3QLI3 93 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 DVL1O14640 695 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 MAGEB3O15480 346 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 CYB5AP00167 134 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 HCKP08631 526 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 PSG2P11465 335 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 AMY2BP19961 511 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 RAB3AP20336 220 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 HNF1AP20823 631 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 GABRA2P47869 451 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 POU3F4P49335 361 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 PDZK1IP1Q13113 114 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 SMIM21Q3B7S5 101 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNF788Q6ZQV5 615 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 BATF2Q8N1L9 274 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 RFT1Q96AA3 541 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 CEP19Q96LK0 163 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 SPACA5Q96QH8 159 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 TAS2R4Q9NYW5 299 aa12.07□□□□□ -0.48
SQSTM1-205ENST00000464493 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 A0A1B0GW55 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 NKX6-3A6NJ46 265 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 NDUFB3O43676 98 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 INMTO95050 263 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L2P0CJ85 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L3P0CJ86 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L4P0CJ87 422 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L5P0CJ88 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L6P0CJ89 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L7P0CJ90 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 HSMCR30P0CW71 290 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 MAP2K4P45985 399 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 IKZF1Q13422 519 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 GPR50Q13585 617 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 KISS1Q15726 138 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 CD276Q5ZPR3 534 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4L9Q6RFH8 374 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 IL17RELQ6ZVW7 336 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 RNF144BQ7Z419 303 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 MS4A15Q8N5U1 240 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 FAM216BQ8N7L0 139 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 OR51A2Q8NGJ7 313 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 MED30Q96HR3 178 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 OR14A2Q96R54 314 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 C7orf69Q9H7B7 122 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 SMURF1Q9HCE7 757 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 DUX4Q9UBX2 424 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
SQSTM1-205ENST00000464493 C2CD3Q4AC94 2353 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNF879B4DU55 563 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 F8VVB4 439 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 F8VWA3 439 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 SPRY1O43609 319 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 MRPS14O60783 128 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 FCN3O75636 299 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 TFF1P04155 84 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 ALDOBP05062 364 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 PRDX2P32119 198 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 RIPPLY3P57055 190 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 PPP3R1P63098 170 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 IL13RA1P78552 427 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 PAX2Q02962 417 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 CRIP3Q6Q6R5 217 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 BTNL3Q6UXE8 466 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 SATL1Q86VE3 508 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 Q8IYB0 196 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 ST8SIA4Q92187 359 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 UFD1Q92890 307 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 ORAI1Q96D31 301 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 CPNE2Q96FN4 548 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 GAFA1Q96PS6 74 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 TMEM138Q9NPI0 162 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 CKLFQ9UBR5 152 aa12.05□□□□□ -0.48
SQSTM1-205ENST00000464493 ZNF222Q9UK12 451 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms