RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 RAB1AP62820 205 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 IKZF1Q13422 519 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 C11orf88Q6PI97 169 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 PCSK4Q6UW60 755 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
COL5A1-205ENST00000464187 STEAP2Q8NFT2 490 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 OR4K15Q8NH41 348 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 DHRS7CA6NNS2 312 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 L7N2F9 121 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
COL5A1-205ENST00000464187 LCATP04180 440 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 SERPINA2P20848 420 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 NFYAP23511 347 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-205ENST00000464187 ZBTB25P24278 435 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
COL5A1-205ENST00000464187 MICBQ29980 383 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 OR8H3Q8N146 312 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 ASB13Q8WXK3 278 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL5A1-205ENST00000464187 IFNA7P01567 189 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 COX5AP20674 150 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 ARR3P36575 388 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 PPP1R1AQ13522 171 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 BEND4Q6ZU67 534 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 LYG2Q86SG7 212 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
COL5A1-205ENST00000464187 OCSTAMPQ9BR26 566 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 ZGRF1Q86YA3 2104 aa12.53□□□□□ -0.4
COL5A1-205ENST00000464187 RPS10-NUDT3A0A1W2PQS6 291 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 NOS1APO75052 506 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-205ENST00000464187 IFNA6P05013 189 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 C4BPBP20851 252 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 CD34P28906 385 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 PRSS12P56730 875 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 TSC22D1Q15714 1073 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 GABRA6Q16445 453 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 ACTBL2Q562R1 376 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 VAX1Q5SQQ9 334 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 DPPA2Q7Z7J5 298 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.41
COL5A1-205ENST00000464187 OR5M8Q8NGP6 311 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 FBXW5Q969U6 566 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 PECRQ9BY49 303 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 UBQLN2Q9UHD9 624 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 ATPIF1Q9UII2 106 aa12.52□□□□□ -0.41
COL5A1-205ENST00000464187 NOP16Q9Y3C1 178 aaKnown RBP12.52□□□□□ -0.41
COL5A1-205ENST00000464187 SMG1Q96Q15 3661 aaKnown RBP12.52□□□□□ -0.41
COL5A1-205ENST00000464187 INTS1Q8N201 2190 aaKnown RBP12.52□□□□□ -0.41
COL5A1-205ENST00000464187 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 TRAV14DV4A0A0A6YYC5 116 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ARPC5O15511 151 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 BLVRBP30043 206 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 CBX5P45973 191 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 SORDQ00796 357 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 RIPPLY1Q0D2K3 151 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ARFRP1Q13795 201 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 GK2Q14410 553 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 CITED4Q96RK1 184 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 S100A13Q99584 98 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 FXYD6Q9H0Q3 95 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ZNF230Q9UIE0 474 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 SNAPC5O75971 98 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 PPP3CBP16298 524 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 BMP5P22003 454 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 OPRM1P35372 400 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 PLP2Q04941 152 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 P2RY6Q15077 328 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 CLVS2Q5SYC1 327 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 MDP1Q86V88 176 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 MARCH1Q8TCQ1 289 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 ELL3Q9HB65 397 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-205ENST00000464187 Q9UFV3 132 aa12.51□□□□□ -0.41
COL5A1-205ENST00000464187 RELNP78509 3460 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 A0A1W2PR80 420 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CCSO14618 274 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CD8AP01732 235 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 COX5BP10606 129 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CCL2P13500 99 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 AMY2BP19961 511 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CCNOP22674 350 aa12.5□□□□□ -0.41
COL5A1-205ENST00000464187 CPT2P23786 658 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms