RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 KLHL13Q9P2N7 655 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 VPS29Q9UBQ0 182 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PADI3Q9ULW8 664 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 LCTP09848 1927 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SMIM35A0A1B0GVV1 85 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 A0A1W2PS29 197 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SHISA7A6NL88 538 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 HHLA1C9JL84 531 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 LAMTOR5O43504 91 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 NUPR1O60356 82 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CTAG2O75638 210 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 JTBO76095 146 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TOX4O94842 621 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SEMA4FO95754 770 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TTRP02766 147 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 DBHP09172 617 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 FURINP09958 794 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 FUT1P19526 365 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GSTM3P21266 225 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ZBTB25P24278 435 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GRPRP30550 384 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GCH1P30793 250 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GNRHRP30968 328 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 NTSR1P30989 418 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ID1P41134 155 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GRK6P43250 576 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 GABRA2P47869 451 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CSNK1A1P48729 337 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ARF3P61204 181 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ARF1P84077 181 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CDC42EP1Q00587 391 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 PAX2Q02962 417 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 RUNX2Q13950 521 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 IHHQ14623 411 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 PGGHGQ32M88 737 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ALG10BQ5I7T1 473 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 XP32Q5T750 250 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 FRG2Q64ET8 278 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 DMKNQ6E0U4 476 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 RD3Q7Z3Z2 195 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM150AQ86TG1 271 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ATOH7Q8N100 152 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 D2HGDHQ8N465 521 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ZFP62Q8NB50 900 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CLEC1AQ8NC01 280 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 OR51A2Q8NGJ7 313 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 OR4S2Q8NH73 311 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ACER1Q8TDN7 264 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 C15orf40Q8WUR7 153 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SLC38A5Q8WUX1 472 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 DNAJB3Q8WWF6 145 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 KCNE4Q8WWG9 221 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ASB11Q8WXH4 323 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 NKD1Q969G9 470 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ACY3Q96HD9 319 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 EAF1Q96JC9 268 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 FRG2BQ96QU4 278 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TRIB3Q96RU7 358 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CD180Q99467 661 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CIPCQ9C0C6 399 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CDT1Q9H211 546 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF160Q9HCG1 818 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 LYRM2Q9NU23 88 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 UQCR10Q9UDW1 63 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CGGBP1Q9UFW8 167 aaPredicted RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ICAM5Q9UMF0 924 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 LSM5Q9Y4Y9 91 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 YLPM1P49750 1951 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SMCHD1A6NHR9 2005 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 MYLKQ15746 1914 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 A0A087WUU8 490 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SPAARA0A1B0GVQ0 90 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 PIN1P1O15428 100 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SLC31A1O15431 190 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 RBFOX2O43251 390 aaKnown RBP eCLIP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ERI3O43414 337 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 WNT11O96014 354 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 DANCRP0C864 163 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 PPIAL4GP0DN37 164 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CTSAP10619 480 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CNN1P51911 297 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 RPL23AP62750 156 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CYCSP99999 105 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF85Q03923 595 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 TLE1Q04724 770 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SRSF4Q08170 494 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 HSPB3Q12988 150 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ELOCQ15369 112 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 ADIRFQ15847 76 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 CEACAM21Q3KPI0 293 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 DNM1P34Q6PK57 102 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 Q6ZWC4 215 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 MEPCEQ7L2J0 689 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 SLC16A9Q7RTY1 509 aa3.17□□□□□ -1.9
COL8A1-205ENST00000463753 MRPL21Q7Z2W9 205 aaKnown RBP3.17□□□□□ -1.9
COL8A1-205ENST00000463753 LINC01465Q8N7H1 131 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms