RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PACRGLQ8N7B6 248 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 ZNF676Q8N7Q3 588 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 MRPS18AQ9NVS2 196 aaKnown RBP13.38□□□□□ -0.27
COL1A1-202ENST00000463440 ERVK13-1Q9NX77 482 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 HHLA2Q9UM44 414 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 MAB21L2Q9Y586 359 aa13.38□□□□□ -0.27
COL1A1-202ENST00000463440 CLDN34H7C241 214 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 RPSAP08865 295 aaKnown RBP13.37□□□□□ -0.27
COL1A1-202ENST00000463440 PRDX2P32119 198 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 COMPP49747 757 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-202ENST00000463440 TTC23Q5W5X9 447 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 UTS2BQ765I0 119 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 CD177Q8N6Q3 437 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 DNAAF1Q8NEP3 725 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 HAVCR2Q8TDQ0 301 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 APH1BQ8WW43 257 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 CYGBQ8WWM9 190 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 FGGYQ96C11 551 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-202ENST00000463440 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-202ENST00000463440 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 HES4Q9HCC6 221 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 NOX4Q9NPH5 578 aa13.37□□□□□ -0.27
COL1A1-202ENST00000463440 IGKV1-27A0A075B6S5 117 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 TRBV23-1A0A0A0MS06 115 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 OR4C45A6NMZ5 311 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 HAX1O00165 279 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 KNG1P01042 644 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 RNASE1P07998 156 aaKnown RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 OCM2P0CE71 109 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 OCMP0CE72 109 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 PRKACBP22694 351 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 RBP2P50120 134 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 GBX2P52951 348 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 ATP1B3P54709 279 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 ERVK11-1P61568 191 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 BLMHQ13867 455 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 SLC9A3R2Q15599 337 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 METAP1DQ6UB28 335 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 C1orf122Q6ZSJ8 110 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 BATF2Q8N1L9 274 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 SETD9Q8NE22 299 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 OR13C3Q8NGS6 347 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 ISG20L2Q9H9L3 353 aaKnown RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 ELL3Q9HB65 397 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-202ENST00000463440 OR14J1Q9UGF5 321 aa13.36□□□□□ -0.27
COL1A1-202ENST00000463440 IRGMA1A4Y4 181 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 M0R1W7 72 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 CYB5AP00167 134 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 CCDC159P0C7I6 412 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 ATF1P18846 271 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 AZGP1P25311 298 aaKnown RBP13.35□□□□□ -0.27
COL1A1-202ENST00000463440 PEX2P28328 305 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 MTCP1P56278 107 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 GUCA2AQ02747 115 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 SMN1Q16637 294 aaKnown RBP13.35□□□□□ -0.27
COL1A1-202ENST00000463440 ZNF691Q5VV52 312 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 SLC25A26Q70HW3 274 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 MKXQ8IYA7 352 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 FAM185AQ8N0U4 392 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 DHRSXQ8N5I4 330 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 Q8N7P7 452 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 SLAMF9Q96A28 289 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 SPSB1Q96BD6 273 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 ZNF649Q9BS31 505 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 COMMD4Q9H0A8 199 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 NEK6Q9HC98 313 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 FGF20Q9NP95 211 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-202ENST00000463440 SIRT7Q9NRC8 400 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 MTCH1Q9NZJ7 389 aa13.35□□□□□ -0.27
COL1A1-202ENST00000463440 A0A1W2PPH5 198 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 TMEM212A6NML5 194 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 HOXA3O43365 443 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-202ENST00000463440 CLIC3O95833 236 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 HKR1P10072 659 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
COL1A1-202ENST00000463440 DCKP27707 260 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 CEBPDP49716 269 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-202ENST00000463440 FOXL1Q12952 345 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 Q6YL49 198 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 LHFPL2Q6ZUX7 228 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 Q8IYB0 196 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 OR51A4Q8NGJ6 313 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 OR5AK2Q8NH90 309 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 CNIH3Q8TBE1 160 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 JAM3Q9BX67 310 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 FAM234AQ9H0X4 552 aa13.34□□□□□ -0.27
COL1A1-202ENST00000463440 METTL8Q9H825 291 aaKnown RBP13.34□□□□□ -0.27
COL1A1-202ENST00000463440 CAB39Q9Y376 341 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-202ENST00000463440 IGKV1-9A0A0C4DH69 117 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 H0YAE9 185 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 INMTO95050 263 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms