RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 TRMT10CQ7L0Y3 403 aaKnown RBP2.57□□□□□ -2
USH2A-203ENST00000463147 CALHM1Q8IU99 346 aa2.57□□□□□ -2
USH2A-203ENST00000463147 CYB561D1Q8N8Q1 229 aa2.57□□□□□ -2
USH2A-203ENST00000463147 OR10G2Q8NGC3 310 aa2.57□□□□□ -2
USH2A-203ENST00000463147 OR1S1Q8NH92 325 aa2.57□□□□□ -2
USH2A-203ENST00000463147 OR1L1Q8NH94 360 aa2.57□□□□□ -2
USH2A-203ENST00000463147 BLNKQ8WV28 456 aa2.57□□□□□ -2
USH2A-203ENST00000463147 ZNF251Q9BRH9 671 aa2.57□□□□□ -2
USH2A-203ENST00000463147 ZNF649Q9BS31 505 aa2.57□□□□□ -2
USH2A-203ENST00000463147 NUDT9Q9BW91 350 aa2.57□□□□□ -2
USH2A-203ENST00000463147 METTL17Q9H7H0 456 aaPredicted RBP2.57□□□□□ -2
USH2A-203ENST00000463147 ZNF355PQ9NSJ1 428 aa2.57□□□□□ -2
USH2A-203ENST00000463147 DDX19AQ9NUU7 478 aaKnown RBP2.57□□□□□ -2
USH2A-203ENST00000463147 RBM12B-AS1Q9P1G2 102 aa2.57□□□□□ -2
USH2A-203ENST00000463147 OR12D3Q9UGF7 316 aa2.57□□□□□ -2
USH2A-203ENST00000463147 ZBED9Q6R2W3 1325 aa2.57□□□□□ -2
USH2A-203ENST00000463147 USP42Q9H9J4 1324 aaKnown RBP2.57□□□□□ -2
USH2A-203ENST00000463147 BAZ1BQ9UIG0 1483 aaKnown RBP2.57□□□□□ -2
USH2A-203ENST00000463147 PEG3Q9GZU2 1588 aa2.57□□□□□ -2
USH2A-203ENST00000463147 IGKV1-6A0A0C4DH72 117 aa2.56□□□□□ -2
USH2A-203ENST00000463147 C1orf232A0A0U1RR37 186 aa2.56□□□□□ -2
USH2A-203ENST00000463147 TMEM213A2RRL7 107 aa2.56□□□□□ -2
USH2A-203ENST00000463147 RBFOX3A6NFN3 312 aa2.56□□□□□ -2
USH2A-203ENST00000463147 TRIM49D1C9J1S8 452 aa2.56□□□□□ -2
USH2A-203ENST00000463147 PRAMEF26H0Y7S4 382 aa2.56□□□□□ -2
USH2A-203ENST00000463147 UPK1AO00322 258 aa2.56□□□□□ -2
USH2A-203ENST00000463147 COCHO43405 550 aa2.56□□□□□ -2
USH2A-203ENST00000463147 MPZL2O60487 215 aa2.56□□□□□ -2
USH2A-203ENST00000463147 IGKV1-39P01597 117 aa2.56□□□□□ -2
USH2A-203ENST00000463147 IGHV3-11P01762 117 aa2.56□□□□□ -2
USH2A-203ENST00000463147 RLN2P04090 185 aa2.56□□□□□ -2
USH2A-203ENST00000463147 IGKV1D-39P04432 117 aa2.56□□□□□ -2
USH2A-203ENST00000463147 ZNF35P13682 527 aa2.56□□□□□ -2
USH2A-203ENST00000463147 TAC1P20366 129 aa2.56□□□□□ -2
USH2A-203ENST00000463147 TSPOP30536 169 aa2.56□□□□□ -2
USH2A-203ENST00000463147 GTF2H1P32780 548 aa2.56□□□□□ -2
USH2A-203ENST00000463147 PMVKQ15126 192 aa2.56□□□□□ -2
USH2A-203ENST00000463147 TRIP13Q15645 432 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 ZNHIT3Q15649 155 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 THOC7Q6I9Y2 204 aaKnown RBP2.56□□□□□ -2
USH2A-203ENST00000463147 MRPL52Q86TS9 123 aaKnown RBP2.56□□□□□ -2
USH2A-203ENST00000463147 CRLF3Q8IUI8 442 aa2.56□□□□□ -2
USH2A-203ENST00000463147 FUNDC1Q8IVP5 155 aa2.56□□□□□ -2
USH2A-203ENST00000463147 BBS7Q8IWZ6 715 aa2.56□□□□□ -2
USH2A-203ENST00000463147 OR4K17Q8NGC6 315 aa2.56□□□□□ -2
USH2A-203ENST00000463147 OR51Q1Q8NH59 317 aa2.56□□□□□ -2
USH2A-203ENST00000463147 IFT81Q8WYA0 676 aa2.56□□□□□ -2
USH2A-203ENST00000463147 CPNE4Q96A23 557 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 CCDC127Q96BQ5 260 aa2.56□□□□□ -2
USH2A-203ENST00000463147 NARS2Q96I59 477 aaKnown RBP2.56□□□□□ -2
USH2A-203ENST00000463147 ARL5BQ96KC2 179 aa2.56□□□□□ -2
USH2A-203ENST00000463147 SMIM8Q96KF7 97 aa2.56□□□□□ -2
USH2A-203ENST00000463147 RILPQ96NA2 401 aa2.56□□□□□ -2
USH2A-203ENST00000463147 CDX2Q99626 313 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 C7orf50Q9BRJ6 194 aaKnown RBP2.56□□□□□ -2
USH2A-203ENST00000463147 MFSD1Q9H3U5 465 aa2.56□□□□□ -2
USH2A-203ENST00000463147 ABCB9Q9NP78 766 aa2.56□□□□□ -2
USH2A-203ENST00000463147 ZNRD1Q9P1U0 126 aa2.56□□□□□ -2
USH2A-203ENST00000463147 ZNF223Q9UK11 482 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 KLF13Q9Y2Y9 288 aaPredicted RBP2.56□□□□□ -2
USH2A-203ENST00000463147 USH1CQ9Y6N9 552 aa2.56□□□□□ -2
USH2A-203ENST00000463147 SMG6Q86US8 1419 aaKnown RBP2.56□□□□□ -2
USH2A-203ENST00000463147 IGHV7-4-1A0A0J9YVY3 117 aa2.55□□□□□ -2
USH2A-203ENST00000463147 TMEM223A0PJW6 202 aa2.55□□□□□ -2
USH2A-203ENST00000463147 HLA-DQA1P01909 254 aa2.55□□□□□ -2
USH2A-203ENST00000463147 OR56A5P0C7T3 313 aa2.55□□□□□ -2
USH2A-203ENST00000463147 LIMS3P0CW19 117 aa2.55□□□□□ -2
USH2A-203ENST00000463147 LIMS4P0CW20 117 aa2.55□□□□□ -2
USH2A-203ENST00000463147 PSMB5P28074 263 aa2.55□□□□□ -2
USH2A-203ENST00000463147 PCK1P35558 622 aa2.55□□□□□ -2
USH2A-203ENST00000463147 PLTPP55058 493 aa2.55□□□□□ -2
USH2A-203ENST00000463147 GRB2P62993 217 aaKnown RBP2.55□□□□□ -2
USH2A-203ENST00000463147 ELF3P78545 371 aaPredicted RBP2.55□□□□□ -2
USH2A-203ENST00000463147 LAMTOR4Q0VGL1 99 aa2.55□□□□□ -2
USH2A-203ENST00000463147 C16orf72Q14CZ0 275 aa2.55□□□□□ -2
USH2A-203ENST00000463147 EXOC3L4Q17RC7 722 aa2.55□□□□□ -2
USH2A-203ENST00000463147 LINC00303Q3SY05 128 aa2.55□□□□□ -2
USH2A-203ENST00000463147 RBM48Q5RL73 367 aaKnown RBP2.55□□□□□ -2
USH2A-203ENST00000463147 ZCCHC6Q5VYS8 1495 aaKnown RBP2.55□□□□□ -2
USH2A-203ENST00000463147 ANKRD12Q6UB98 2062 aa2.55□□□□□ -2
USH2A-203ENST00000463147 CLEC19AQ6UXS0 136 aa2.55□□□□□ -2
USH2A-203ENST00000463147 ZFP2Q6ZN57 461 aa2.55□□□□□ -2
USH2A-203ENST00000463147 CYP4Z2PQ8N1L4 340 aa2.55□□□□□ -2
USH2A-203ENST00000463147 RNF175Q8N4F7 328 aa2.55□□□□□ -2
USH2A-203ENST00000463147 CCNYL1Q8N7R7 359 aa2.55□□□□□ -2
USH2A-203ENST00000463147 TTLQ8NG68 377 aa2.55□□□□□ -2
USH2A-203ENST00000463147 ENKURQ8TC29 256 aa2.55□□□□□ -2
USH2A-203ENST00000463147 PHF10Q8WUB8 498 aaKnown RBP2.55□□□□□ -2
USH2A-203ENST00000463147 CCL17Q92583 94 aa2.55□□□□□ -2
USH2A-203ENST00000463147 RAD50Q92878 1312 aa2.55□□□□□ -2
USH2A-203ENST00000463147 LRRC45Q96CN5 670 aa2.55□□□□□ -2
USH2A-203ENST00000463147 FMC1Q96HJ9 113 aa2.55□□□□□ -2
USH2A-203ENST00000463147 FAM210AQ96ND0 272 aa2.55□□□□□ -2
USH2A-203ENST00000463147 ZNF382Q96SR6 550 aa2.55□□□□□ -2
USH2A-203ENST00000463147 HBEGFQ99075 208 aa2.55□□□□□ -2
USH2A-203ENST00000463147 POMKQ9H5K3 350 aa2.55□□□□□ -2
USH2A-203ENST00000463147 ASB7Q9H672 318 aa2.55□□□□□ -2
USH2A-203ENST00000463147 PARVGQ9HBI0 331 aa2.55□□□□□ -2
USH2A-203ENST00000463147 SND1-IT1Q9HBX3 110 aa2.55□□□□□ -2
USH2A-203ENST00000463147 C1orf109Q9NX04 203 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms