RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 PLEKHA1Q9HB21 404 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 SEBOXQ9HB31 216 aaPredicted RBP4.33□□□□□ -1.72
PDCD4-204ENST00000462577 PATZ1Q9HBE1 687 aaKnown RBP4.33□□□□□ -1.72
PDCD4-204ENST00000462577 TMEM165Q9HC07 324 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 SMURF1Q9HCE7 757 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 PAK1IP1Q9NWT1 392 aaPredicted RBP4.33□□□□□ -1.72
PDCD4-204ENST00000462577 C1orf123Q9NWV4 160 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 CHCHD3Q9NX63 227 aaKnown RBP4.33□□□□□ -1.72
PDCD4-204ENST00000462577 DCAF16Q9NXF7 216 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 BABAM2Q9NXR7 383 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 RASL12Q9NYN1 266 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 ERVK-18Q9QC07 812 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 GTF2A1LQ9UNN4 478 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 LRCH1Q9Y2L9 728 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 TPRKBQ9Y3C4 175 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 PPIAL4AQ9Y536 164 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 PCDHGB5Q9Y5G0 923 aa4.33□□□□□ -1.72
PDCD4-204ENST00000462577 TRAV38-1A0A0B4J264 116 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 TRBV2A0A0J9YWF9 115 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 TRBV5-5A0A0J9YX44 114 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 OOEPA6NGQ2 149 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 A6NLC8 198 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 CEACAM18A8MTB9 384 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ZNF732B4DXR9 585 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 FAM157AC9JC47 383 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 J3QLI3 93 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 J3QT63 122 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 WNT9BO14905 357 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MYL12BO14950 172 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PLPP2O43688 288 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 LMX1BO60663 402 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 FOXH1O75593 365 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GPX5O75715 221 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 CYB5R3P00387 301 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 LALBAP00709 142 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 SERPINA3P01011 423 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GRPP07492 148 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MSMBP08118 114 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 WNT2P09544 360 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ATF1P18846 271 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PCMT1P22061 227 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PRKACBP22694 351 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GATA3P23771 443 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 C21orf33P30042 268 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 NPY4RP50391 375 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 FUT6P51993 359 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GTF2A1P52655 376 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 RPS11P62280 158 aaKnown RBP eCLIP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 IL24Q13007 206 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GPR50Q13585 617 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 TBCEQ15813 527 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 UBE2V2Q15819 145 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 KIAA2026Q5HYC2 2103 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 CEP78Q5JTW2 689 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 AVPI1Q5T686 147 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ATPAF1Q5TC12 328 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PLCXD3Q63HM9 321 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 XAF1Q6GPH4 301 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 FAM166AQ6J272 317 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MOB3CQ70IA8 216 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PRSS48Q7RTY5 328 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ZNF573Q86YE8 665 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ZNF676Q8N7Q3 588 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 POC1AQ8NBT0 407 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MAPK1IP1LQ8NDC0 245 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 BPIFB6Q8NFQ5 453 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 OR10AC1Q8NH08 325 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 OR51F2Q8NH61 342 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GPR148Q8TDV2 347 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 LRRC29Q8WV35 223 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 AQP3Q92482 292 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 RGP1Q92546 391 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MSI2Q96DH6 328 aaKnown RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ADAT3Q96EY9 351 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 NEIL1Q96FI4 390 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 RNF170Q96K19 258 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 PGLYRP3Q96LB9 341 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 HIST1H2AAQ96QV6 131 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 SMR3AQ99954 134 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 GAL3ST1Q99999 423 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 TMEM246Q9BRR3 403 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 YTHDF1Q9BYJ9 559 aaKnown RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 RHOFQ9HBH0 211 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 HES4Q9HCC6 221 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 ISYNA1Q9NPH2 558 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 TREM2Q9NZC2 230 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 KAAG1Q9UBP8 84 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 LPAR3Q9UBY5 353 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 CLEC2DQ9UHP7 191 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 BLOC1S6Q9UL45 172 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 SLC7A11Q9UPY5 501 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 POLDIP2Q9Y2S7 368 aa4.32□□□□□ -1.72
PDCD4-204ENST00000462577 SIRT4Q9Y6E7 314 aaPredicted RBP4.32□□□□□ -1.72
PDCD4-204ENST00000462577 MXRA5Q9NR99 2828 aa4.31□□□□□ -1.72
PDCD4-204ENST00000462577 IGKV1-27A0A075B6S5 117 aa4.31□□□□□ -1.72
PDCD4-204ENST00000462577 TRBV5-7A0A0A0MS05 114 aa4.31□□□□□ -1.72
PDCD4-204ENST00000462577 IGKV1-9A0A0C4DH69 117 aa4.31□□□□□ -1.72
PDCD4-204ENST00000462577 A8MV72 311 aaPredicted RBP4.31□□□□□ -1.72
PDCD4-204ENST00000462577 CDIPTO14735 213 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms