RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 LRRC75BQ2VPJ9 315 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 SSX6Q7RTT6 188 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 MKXQ8IYA7 352 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 YIPF7Q8N8F6 280 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 CIB1Q99828 191 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 SSX3Q99909 188 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 PPA2Q9H2U2 334 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 HEXA-AS1Q9H8Q6 139 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 SLC22A13Q9Y226 551 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 AP4S1Q9Y587 144 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 HTR1FP30939 366 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 ERVK11-1P61568 191 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 C1orf146Q5VVC0 180 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 TMEM200BQ69YZ2 307 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 CALHM1Q8IU99 346 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 C17orf50Q8WW18 174 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 AJUBAQ96IF1 538 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 GABARAPL3Q9BY60 117 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 MEGF9Q9H1U4 602 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 FBLN5Q9UBX5 448 aa18.54■□□□□ 0.56
PTPN4-207ENST00000460162 RPP14O95059 124 aaKnown RBP18.53■□□□□ 0.56
PTPN4-207ENST00000460162 TK1P04183 234 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 OR2T7P0C7T2 308 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 C2orf68Q2NKX9 166 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 CATSPERDQ86XM0 798 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 C11orf42Q8N5U0 333 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 CCDC54Q8NEL0 328 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 OR2T27Q8NH04 317 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 TBX5Q99593 518 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 RAB18Q9NP72 206 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 OR14J1Q9UGF5 321 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 SLC7A11Q9UPY5 501 aa18.53■□□□□ 0.56
PTPN4-207ENST00000460162 TET2Q6N021 2002 aaPredicted RBP18.52■□□□□ 0.56
PTPN4-207ENST00000460162 A0A1W2PQL4 384 aaPredicted RBP18.52■□□□□ 0.56
PTPN4-207ENST00000460162 A6NIN4 97 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 SYT7O43581 403 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 GATBO75879 557 aaKnown RBP18.52■□□□□ 0.56
PTPN4-207ENST00000460162 SULT1C4O75897 302 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 CCL3L1P16619 93 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 GABRA5P31644 462 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 ERVFRD-1P60508 538 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 ZNF273Q14593 569 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 SLC35E4Q6ICL7 350 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 C11orf88Q6PI97 169 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 LIAT1Q6ZQX7 453 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 AMIGO2Q86SJ2 522 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 OR4M1Q8NGD0 313 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 TRMT10AQ8TBZ6 339 aaKnown RBP18.52■□□□□ 0.56
PTPN4-207ENST00000460162 CHST5Q9GZS9 411 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 RANBP3Q9H6Z4 567 aaPredicted RBP18.52■□□□□ 0.56
PTPN4-207ENST00000460162 DSCAML1Q8TD84 2053 aa18.52■□□□□ 0.56
PTPN4-207ENST00000460162 METTL15A6NJ78 407 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 TSPAN15O95858 294 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 TMED1Q13445 227 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 ANGPTL5Q86XS5 388 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 BATF2Q8N1L9 274 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 OR4C13Q8NGP0 309 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 OR8J1Q8NGP2 316 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 RORBQ92753 470 aa18.51■□□□□ 0.55
PTPN4-207ENST00000460162 FAM230AA0A1W2PPH8 454 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 K7N7A8 449 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 ATP5HO75947 161 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 COX7A1P24310 79 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 BMXP51813 675 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 LY6EQ16553 131 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 ODF4Q2M2E3 257 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 FAM220AQ7Z4H9 259 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 ASCC1Q8N9N2 400 aaKnown RBP18.5■□□□□ 0.55
PTPN4-207ENST00000460162 OR10H4Q8NGA5 316 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 RFKQ969G6 155 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 C10orf35Q96D05 121 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 CEP19Q96LK0 163 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 OAZ3Q9UMX2 235 aa18.5■□□□□ 0.55
PTPN4-207ENST00000460162 TGP01266 2768 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 C17orf98A8MV24 154 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 APOL3O95236 402 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 RBP4P02753 201 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 CHRM2P08172 466 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 UBCP0CG48 685 aaKnown RBP18.49■□□□□ 0.55
PTPN4-207ENST00000460162 FUT6P51993 359 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 LGALS4P56470 323 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 COL10A1Q03692 680 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 UBE2V2Q15819 145 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 CRIP3Q6Q6R5 217 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 CENPNQ96H22 339 aaPredicted RBP18.49■□□□□ 0.55
PTPN4-207ENST00000460162 ADI1Q9BV57 179 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 OSBPL10Q9BXB5 764 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 RIBC2Q9H4K1 309 aa18.49■□□□□ 0.55
PTPN4-207ENST00000460162 LOC107986453A0A1B0GWG9 222 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 ZNF737O75373 536 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 PIPP12273 146 aaPredicted RBP18.48■□□□□ 0.55
PTPN4-207ENST00000460162 ATP6V1E1P36543 226 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 POLR2IP36954 125 aaKnown RBP18.48■□□□□ 0.55
PTPN4-207ENST00000460162 KIR2DS4P43632 304 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 EFNB2P52799 333 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 DLX6P56179 175 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 ISL1P61371 349 aa18.48■□□□□ 0.55
PTPN4-207ENST00000460162 CNN3Q15417 329 aaKnown RBP18.48■□□□□ 0.55
PTPN4-207ENST00000460162 ZNF782Q6ZMW2 699 aaPredicted RBP18.48■□□□□ 0.55
PTPN4-207ENST00000460162 PPP1R35Q8TAP8 253 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms