RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PRSS58Q8IYP2 241 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 FAM185AQ8N0U4 392 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 LFNGQ8NES3 379 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 OR8G5Q8NG78 346 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 SPTSSAQ969W0 71 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 NABP1Q96AH0 204 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 DNAJA3Q96EY1 480 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 FAM71F1Q96KD3 344 aaPredicted RBP5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 LYZL4Q96KX0 146 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 TAAR9Q96RI9 348 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 SYT3Q9BQG1 590 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 GINS3Q9BRX5 216 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 ST6GALNAC5Q9BVH7 336 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 METTL9Q9H1A3 318 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 RGCCQ9H4X1 137 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 BANF2Q9H503 90 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 IFT22Q9H7X7 185 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 NECAP2Q9NVZ3 263 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 COA4Q9NYJ1 87 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF319Q9P2F9 582 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 ANXA10Q9UJ72 324 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 RARRES3Q9UL19 164 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 PTRH2Q9Y3E5 179 aaKnown RBP5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 CACNA1AO00555 2505 aa5.36□□□□□ -1.55
UBQLN4-202ENST00000459954 NCKAP5O14513 1909 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 DUXBA0A1W2PPF3 345 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 GJE1A6NN92 205 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 COLCA2A8K830 154 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 FAM157AC9JC47 383 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 STMND1H3BQB6 276 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TERTO14746 1132 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 GPR137BO60478 399 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MED6O75586 246 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SERPINA5P05154 406 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 CST2P09228 141 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 DANCRP0C864 163 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SPP1P10451 314 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 FCGR2AP12318 317 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MMP9P14780 707 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MUC1P15941 1255 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 LMO1P25800 156 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 FCGR2CP31995 323 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 CDAP32320 146 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 LPAR6P43657 344 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 P2RY1P47900 373 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 NPBWR1P48145 328 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 NOVA1P51513 510 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 DSCR4P56555 118 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RAB5BP61020 215 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RAB1AP62820 205 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MFAP5Q13361 173 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM187Q14656 261 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RAB35Q15286 201 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 CNN3Q15417 329 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SHBQ15464 509 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 UBE2V2Q15819 145 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 EXT1Q16394 746 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RSPO1Q2MKA7 263 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 IAH1Q2TAA2 248 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 KRTAP27-1Q3LI81 207 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM176BQ3YBM2 270 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 GGNBP1Q5YKI7 109 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM42Q69YG0 159 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RPL7L1Q6DKI1 246 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM211Q6ICI0 200 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TCEAL6Q6IPX3 200 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RPUSD3Q6P087 351 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MRPL14Q6P1L8 145 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 LHFPL2Q6ZUX7 228 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM123Q8N131 208 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF561Q8N587 486 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 WDSUB1Q8N9V3 476 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 CCDC71LQ8N9Z2 235 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 Q8NFD4 153 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SEMA6DQ8NFY4 1073 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 OR9K2Q8NGE7 335 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 M1APQ8TC57 530 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TCEAL3Q969E4 200 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MALSU1Q96EH3 234 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 KIRREL1Q96J84 757 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RASL10BQ96S79 203 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SPSB2Q99619 263 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 PIGQQ9BRB3 760 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 NUDT22Q9BRQ3 303 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 TCEAL7Q9BRU2 100 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 DEFB126Q9BYW3 111 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 HIPK2Q9H2X6 1198 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SAV1Q9H4B6 383 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 BCO1Q9HAY6 547 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 PLEKHJ1Q9NW61 149 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 ATPIF1Q9UII2 106 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 METRNQ9UJH8 293 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 PADI1Q9ULC6 663 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 AMDHD2Q9Y303 409 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 MRPS18CQ9Y3D5 142 aaKnown RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 CHCHD2Q9Y6H1 151 aaPredicted RBP5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 RTTNQ86VV8 2226 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 SHANK1Q9Y566 2161 aa5.35□□□□□ -1.55
UBQLN4-202ENST00000459954 IGHV3-20A0A0C4DH32 117 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms