RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SLC25A43Q8WUT9 341 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 DDIT4LQ96D03 193 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 CYYR1Q96J86 154 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 PECRQ9BY49 303 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 IGFLR1Q9H665 355 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 PNRC2Q9NPJ4 139 aaKnown RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 FAM212BQ9NTI7 297 aaPredicted RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 FAM86C1Q9NVL1 165 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 ZNF319Q9P2F9 582 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 C14orf166Q9Y224 244 aaKnown RBP7.46□□□□□ -1.22
VPS50-208ENST00000458707 UNC13CQ8NB66 2214 aa7.46□□□□□ -1.22
VPS50-208ENST00000458707 A0A1W2PPE3 182 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CRYM-AS1A6NIL9 109 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 LY86O95711 162 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 HPNP05981 417 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CTSDP07339 412 aaPredicted RBP7.45□□□□□ -1.22
VPS50-208ENST00000458707 PGA4P0DJD7 388 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 PGA3P0DJD8 388 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 NR2C1P13056 603 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 FOSL2P15408 326 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 RBMXP38159 391 aaKnown RBP7.45□□□□□ -1.22
VPS50-208ENST00000458707 C1orf122Q6ZSJ8 110 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SLC16A14Q7RTX9 510 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 NOXO1Q8NFA2 376 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 OR14K1Q8NGZ2 314 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 FNDC9Q8TBE3 224 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CA5BP1Q8WTZ4 195 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 RNF138Q8WVD3 245 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 KLHDC7BQ96G42 594 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SHDQ96IW2 340 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 EMC6Q9BV81 110 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 ST6GALNAC5Q9BVH7 336 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CERS4Q9HA82 394 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 LMAN1LQ9HAT1 526 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 MMP17Q9ULZ9 603 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 ARID1AO14497 2285 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 A0A1B0GW64 132 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 BTBD17A6NE02 478 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 LINC01565O15544 149 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 TSPAN15O95858 294 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 GIMD1P0DJR0 217 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 RAB5AP20339 215 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 ANOS1P23352 680 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CTSSP25774 331 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 FABP9Q0Z7S8 132 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 RHEBQ15382 184 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 GUK1Q16774 197 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 CHRFAM7AQ494W8 412 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 MIDNQ504T8 468 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SLC25A53Q5H9E4 307 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SLC25A47Q6Q0C1 308 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 C1QL4Q86Z23 238 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SGPP2Q8IWX5 399 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 PNLDC1Q8NA58 520 aaKnown RBP7.45□□□□□ -1.22
VPS50-208ENST00000458707 OR51T1Q8NGJ9 327 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 OR2AJ1Q8NGZ0 328 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 TCTEX1D2Q8WW35 142 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 MEGF10Q96KG7 1140 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 C5orf34Q96MH7 638 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 GPER1Q99527 375 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 VN1R1Q9GZP7 353 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
VPS50-208ENST00000458707 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
VPS50-208ENST00000458707 RGCCQ9H4X1 137 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 SLC2A4RGQ9NR83 387 aa7.45□□□□□ -1.22
VPS50-208ENST00000458707 A0A1W2PPC4 97 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 A6NLC8 198 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 VSTM2BA6NLU5 285 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 E5RGE8 158 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 H7C1Q1 480 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 MASP2O00187 686 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 BCAT2O15382 392 aaPredicted RBP7.44□□□□□ -1.22
VPS50-208ENST00000458707 EFNA2O43921 213 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 KNG1P01042 644 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 IFNA21P01568 189 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 OR8U8P0C7N1 319 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 FBLP22087 321 aaKnown RBP7.44□□□□□ -1.22
VPS50-208ENST00000458707 BLVRBP30043 206 aaPredicted RBP7.44□□□□□ -1.22
VPS50-208ENST00000458707 P2RY1P47900 373 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 RAB5CP51148 216 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 CLRN1P58418 232 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 GRB2P62993 217 aaKnown RBP7.44□□□□□ -1.22
VPS50-208ENST00000458707 FOXF1Q12946 379 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 KISS1Q15726 138 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 HIST3H3Q16695 136 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 GGNBP1Q5YKI7 109 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 Q6ZSR3 168 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 COMMD2Q86X83 199 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 FOXRED2Q8IWF2 684 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 PLPP5Q8NEB5 264 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 SEMA6DQ8NFY4 1073 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 OR1J1Q8NGS3 322 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 FAM71F1Q96KD3 344 aaPredicted RBP7.44□□□□□ -1.22
VPS50-208ENST00000458707 IP6K3Q96PC2 410 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms