RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 LIMS4P0CW20 117 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 CALCBP10092 127 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 MYL12AP19105 171 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 AZGP1P25311 298 aaKnown RBP15.44■□□□□ 0.06
USP39-209ENST00000458268 TGM4P49221 684 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 CCR9P51686 369 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 ATP1B3P54709 279 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 OR2G6Q5TZ20 316 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 FDX2Q6P4F2 183 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 Q6ZSR3 168 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 TBX15Q96SF7 602 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 DNTTIP1Q9H147 329 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 CNTD2Q9H8S5 307 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 NEK6Q9HC98 313 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 FGF20Q9NP95 211 aaPredicted RBP15.44■□□□□ 0.06
USP39-209ENST00000458268 SIRT7Q9NRC8 400 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 TNFRSF19Q9NS68 423 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 CHCHD3Q9NX63 227 aaKnown RBP15.44■□□□□ 0.06
USP39-209ENST00000458268 RASL12Q9NYN1 266 aa15.44■□□□□ 0.06
USP39-209ENST00000458268 TRBV2A0A0J9YWF9 115 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 A0A1W2PRD5 423 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 A0A1W2PRF3 423 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 A0A1W2PRM7 423 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 IRGMA1A4Y4 181 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 SLC1A7O00341 560 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 CASQ2O14958 399 aaPredicted RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 SPRY1O43609 319 aaPredicted RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 CCDC159P0C7I6 412 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 ATF1P18846 271 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 SOX2P48431 317 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 DLX1P56177 255 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 MTCP1P56278 107 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 BAMBIQ13145 260 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 ATPAF1Q5TC12 328 aaPredicted RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 TMPRSS11AQ6ZMR5 421 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 VMO1Q7Z5L0 202 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 CD177Q8N6Q3 437 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 ASCC1Q8N9N2 400 aaKnown RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 OR5D18Q8NGL1 313 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 EMG1Q92979 244 aaKnown RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 ZDHHC16Q969W1 377 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 CEP19Q96LK0 163 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 ZNF48Q96MX3 618 aaPredicted RBP15.43■□□□□ 0.06
USP39-209ENST00000458268 DCTN5Q9BTE1 182 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 PKIBQ9C010 78 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 ESM1Q9NQ30 184 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 DHDHQ9UQ10 334 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 MAB21L2Q9Y586 359 aa15.43■□□□□ 0.06
USP39-209ENST00000458268 TMEM212A6NML5 194 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 H0YHG0 523 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 XPNPEP2O43895 674 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 ZFPL1O95159 310 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 CYB5AP00167 134 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 ISG15P05161 165 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 HCKP08631 526 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 DCKP27707 260 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 PRDX2P32119 198 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 RBP2P50120 134 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 SLC34A1Q06495 639 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 IL24Q13007 206 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 EGFL6Q8IUX8 553 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 CMTM4Q8IZR5 234 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 BPIFB6Q8NFQ5 453 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 SPATA3Q8NHX4 192 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 C10orf35Q96D05 121 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 TMEM80Q96HE8 168 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 OPALINQ96PE5 141 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 NRIP2Q9BQI9 281 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 ZNF649Q9BS31 505 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 SIRPDQ9H106 197 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 MRPS18AQ9NVS2 196 aaKnown RBP15.42■□□□□ 0.06
USP39-209ENST00000458268 CLEC2DQ9UHP7 191 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 ZNF222Q9UK12 451 aa15.42■□□□□ 0.06
USP39-209ENST00000458268 IGKV1-9A0A0C4DH69 117 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 DNAJC9-AS1A6NH13 148 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 F8VVB4 439 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 F8VWA3 439 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 PIPP12273 146 aaPredicted RBP15.41■□□□□ 0.06
USP39-209ENST00000458268 PRKACBP22694 351 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 MPZP25189 248 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 MRPL28Q13084 256 aaKnown RBP15.41■□□□□ 0.06
USP39-209ENST00000458268 IL18R1Q13478 541 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 MED21Q13503 144 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 XAF1Q6GPH4 301 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 USP43Q70EL4 1123 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 AHSA2Q719I0 299 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 ZFP41Q8N8Y5 198 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 ZDHHC22Q8N966 263 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 OR4M1Q8NGD0 313 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 GATAD2BQ8WXI9 593 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 MTCH1Q9NZJ7 389 aa15.41■□□□□ 0.06
USP39-209ENST00000458268 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
USP39-209ENST00000458268 EXOSC1Q9Y3B2 195 aaKnown RBP15.41■□□□□ 0.06
USP39-209ENST00000458268 CENPVL3A0A0U1RRI6 287 aa15.4■□□□□ 0.06
USP39-209ENST00000458268 PNMA8CA0A1B0GUJ8 204 aa15.4■□□□□ 0.06
USP39-209ENST00000458268 MEX3AA1L020 520 aaKnown RBP15.4■□□□□ 0.06
USP39-209ENST00000458268 H0YAE9 185 aa15.4■□□□□ 0.06
USP39-209ENST00000458268 GPR37O15354 613 aa15.4■□□□□ 0.06
USP39-209ENST00000458268 ANGPTL7O43827 346 aa15.4■□□□□ 0.06
USP39-209ENST00000458268 MMP9P14780 707 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms