RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 HTR1AP08908 422 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 GABRB1P18505 474 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 CEBPDP49716 269 aaPredicted RBP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 DLX1P56177 255 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 OR12D2P58182 307 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 ERVK11-1P61568 191 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 KLRD1Q13241 179 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 CNN3Q15417 329 aaKnown RBP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 NCR3LG1Q68D85 454 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 FDX2Q6P4F2 183 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 ENTHD1Q8IYW4 607 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 RDH10Q8IZV5 341 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 PP6455Q8WZ26 134 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 TAF15Q92804 592 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 BORCS8Q96FH0 119 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 MRPL48Q96GC5 212 aaKnown RBP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 Q96MT0 163 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 MYCBPQ99417 103 aaPredicted RBP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 UNKLQ9H9P5 680 aaKnown RBP17.41■□□□□ 0.38
HMGB3-205ENST00000455596 FRRS1LQ9P0K9 344 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 OR14J1Q9UGF5 321 aa17.41■□□□□ 0.38
HMGB3-205ENST00000455596 TENM1Q9UKZ4 2725 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 NPFFO15130 113 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 KNG1P01042 644 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 ISG15P05161 165 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 DBTP11182 482 aaKnown RBP17.4■□□□□ 0.38
HMGB3-205ENST00000455596 ACTA2P62736 377 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 ACTG2P63267 376 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 PRB3Q04118 309 aaPredicted RBP17.4■□□□□ 0.38
HMGB3-205ENST00000455596 ZNF91Q05481 1191 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 SHISA2Q6UWI4 295 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 SGMS2Q8NHU3 365 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 TNFRSF14Q92956 283 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 LGALS12Q96DT0 336 aa17.4■□□□□ 0.38
HMGB3-205ENST00000455596 ANK2Q01484 3957 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 IGKV1-27A0A075B6S5 117 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 LOC100130705A0A1B0GUX0 176 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 A0A1W2PPH5 198 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 A0A1W2PRD5 423 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 A0A1W2PRF3 423 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 A0A1W2PRM7 423 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 POM121CA8CG34 1229 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 H0YAE9 185 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 J3QLW9 94 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 BAG2O95816 211 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 FBP1P09467 338 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 ZNF19P17023 458 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 OMGP23515 440 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 IER3P46695 156 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 CCR9P51686 369 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 OR5D13Q8NGL4 314 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 RHOXF1Q8NHV9 184 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 C4orf36Q96KX1 117 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 CEP19Q96LK0 163 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 DPAGT1Q9H3H5 408 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 C19orf12Q9NSK7 152 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 FAM118AQ9NWS6 357 aa17.39■□□□□ 0.37
HMGB3-205ENST00000455596 ZNF20P17024 532 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 MDKP21741 143 aaPredicted RBP17.38■□□□□ 0.37
HMGB3-205ENST00000455596 RBP2P50120 134 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 UBE2E1P51965 193 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 NANOS3P60323 173 aaKnown RBP17.38■□□□□ 0.37
HMGB3-205ENST00000455596 RPL15P61313 204 aaKnown RBP17.38■□□□□ 0.37
HMGB3-205ENST00000455596 RPL31P62899 125 aaKnown RBP17.38■□□□□ 0.37
HMGB3-205ENST00000455596 GALEQ14376 348 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 DNAAF1Q8NEP3 725 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 DYRK2Q92630 601 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 STMN2Q93045 179 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 SLAMF9Q96A28 289 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 ADAT3Q96EY9 351 aaPredicted RBP17.38■□□□□ 0.37
HMGB3-205ENST00000455596 PELI1Q96FA3 418 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 ALG8Q9BVK2 526 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 FAM234AQ9H0X4 552 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 MTCH1Q9NZJ7 389 aa17.38■□□□□ 0.37
HMGB3-205ENST00000455596 FADS2O95864 444 aaKnown RBP17.37■□□□□ 0.37
HMGB3-205ENST00000455596 IGHV4-59P01825 116 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 TK1P04183 234 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 ATP1B3P54709 279 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 ACSM1Q08AH1 577 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 SLC25A26Q70HW3 274 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 UTS2BQ765I0 119 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 LHFPL3Q86UP9 236 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 OR4F5Q8NH21 305 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 FGGYQ96C11 551 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 C1RLQ9NZP8 487 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 ZNRD1Q9P1U0 126 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 HHLA2Q9UM44 414 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 MMP24Q9Y5R2 645 aa17.37■□□□□ 0.37
HMGB3-205ENST00000455596 A0A1B0GUS0 222 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 INMTO95050 263 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 PAHP00439 452 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 CHRM2P08172 466 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 ATF1P18846 271 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 PRKACBP22694 351 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 SAA4P35542 130 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 RAG2P55895 527 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 COL10A1Q03692 680 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 RAB40BQ12829 278 aa17.36■□□□□ 0.37
HMGB3-205ENST00000455596 ALKBH1Q13686 389 aaKnown RBP17.36■□□□□ 0.37
HMGB3-205ENST00000455596 ZSCAN26Q16670 478 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms