RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PLEKHF2Q9H8W4 249 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 PALMDQ9NP74 551 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 IL36RNQ9UBH0 155 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 CACNG2Q9Y698 323 aa9.29□□□□□ -0.92
SCN9A-205ENST00000454569 POLQO75417 2590 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 ABCA12Q86UK0 2595 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 ARID1AO14497 2285 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 A0A0A6YYD4 124 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 OR5B21A6NL26 309 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 B9A039 149 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 M0R233 179 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 ELK1P19419 428 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 CD33P20138 364 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 BCL3P20749 454 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 CD40LGP29965 261 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 CD200P41217 278 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 PSMD7P51665 324 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 SELENOVP59797 346 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 KRTAP10-9P60411 292 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 SLC22A6Q4U2R8 563 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 CDH26Q8IXH8 852 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 FBXL14Q8N1E6 418 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 SAMD12Q8N8I0 201 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 OR51F2Q8NH61 342 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 FOXRED1Q96CU9 486 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-205ENST00000454569 DIRAS2Q96HU8 199 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 TECTBQ96PL2 329 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 SPATA2Q9UM82 520 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 LAMP3Q9UQV4 416 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 VPS13CQ709C8 3753 aa9.28□□□□□ -0.92
SCN9A-205ENST00000454569 ASH1LQ9NR48 2969 aaKnown RBP9.27□□□□□ -0.92
SCN9A-205ENST00000454569 APCP25054 2843 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 LRP5LA4QPB2 252 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM14DPA8MWL7 114 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 FAM25AB3EWG3 89 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 FAM25CB3EWG5 89 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 FAM25GB3EWG6 89 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 WNT9BO14905 357 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 AKR7A2O43488 359 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM127O75204 238 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 NDUFS7O75251 213 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 LY6HO94772 140 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 KDM4BO94953 1096 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 PTBP3O95758 552 aaKnown RBP9.27□□□□□ -0.93
SCN9A-205ENST00000454569 HPXP02790 462 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TFF1P04155 84 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 COX6B1P14854 86 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 ARSBP15848 533 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 EGR1P18146 543 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 SERPINA2P20848 420 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 MPZP25189 248 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 PPP5CP53041 499 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 GMFBP60983 142 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.93
SCN9A-205ENST00000454569 RIN1Q13671 783 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 PDCD1Q15116 288 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 MOGAT2Q3SYC2 334 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 FAM201AQ5SY85 155 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 MOGAT3Q86VF5 341 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 C19orf18Q8NEA5 215 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF671Q8TAW3 534 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 NICN1Q9BSH3 213 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TRAF4Q9BUZ4 470 aaPredicted RBP9.27□□□□□ -0.93
SCN9A-205ENST00000454569 SLC22A4Q9H015 551 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 TLNRD1Q9H1K6 362 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 WDR13Q9H1Z4 485 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 CLEC4MQ9H2X3 399 aaPredicted RBP9.27□□□□□ -0.93
SCN9A-205ENST00000454569 NEK6Q9HC98 313 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 RBFOX1Q9NWB1 397 aaKnown RBP9.27□□□□□ -0.93
SCN9A-205ENST00000454569 C1orf123Q9NWV4 160 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 KIAA2026Q5HYC2 2103 aa9.27□□□□□ -0.93
SCN9A-205ENST00000454569 DOCK11Q5JSL3 2073 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 VSTM5A8MXK1 200 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 HTR3BO95264 441 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 ADH4P08319 380 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 CDKN1AP38936 164 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 SNU13P55769 128 aaKnown RBP9.26□□□□□ -0.93
SCN9A-205ENST00000454569 FAM131AQ6UXB0 335 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 WDR82Q6UXN9 313 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 DTX2Q86UW9 622 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 LRRC28Q86X40 367 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-205ENST00000454569 IZUMO1Q8IYV9 350 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 VRK1Q99986 396 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-205ENST00000454569 MRI1Q9BV20 369 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 ELL3Q9HB65 397 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-205ENST00000454569 GCM1Q9NP62 436 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 DYNLRB1Q9NP97 96 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 CBLN4Q9NTU7 201 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 ZDHHC8Q9ULC8 765 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 V9GYH0 126 aa9.26□□□□□ -0.93
SCN9A-205ENST00000454569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.25□□□□□ -0.93
SCN9A-205ENST00000454569 A6NLC8 198 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 J3QT63 122 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 CDC14BO60729 498 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF205O95201 554 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 BPNT1O95861 308 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms