RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 OR13F1Q8NGS4 319 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 OR51F2Q8NH61 342 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 GAL3ST1Q99999 423 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 CHCHD6Q9BRQ6 235 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 TMEM246Q9BRR3 403 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 SNTG1Q9NSN8 517 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 HIVEP1P15822 2718 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 FGF9P31371 208 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-207ENST00000451876 MKXQ8IYA7 352 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 JAGN1Q8N5M9 183 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 NKAIN3Q8N8D7 197 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 TNFAIP8L1Q8WVP5 186 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 CPNE2Q96FN4 548 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-207ENST00000451876 CEP19Q96LK0 163 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 GFI1Q99684 422 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 FAM192AQ9GZU8 254 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 RNF167Q9H6Y7 350 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 HES4Q9HCC6 221 aa20.13■□□□□ 0.81
CPSF4-207ENST00000451876 ACAA1P09110 424 aaPredicted RBP20.12■□□□□ 0.81
CPSF4-207ENST00000451876 TMEM225BP0DP42 221 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 BCL3P20749 454 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 ALDH3B2P48448 385 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 LOXL1Q08397 574 aaPredicted RBP20.12■□□□□ 0.81
CPSF4-207ENST00000451876 TMEM155Q4W5P6 130 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 MUC20Q8N307 709 aaPredicted RBP20.12■□□□□ 0.81
CPSF4-207ENST00000451876 OR5T2Q8NGG2 359 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 CNTD2Q9H8S5 307 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 SMURF1Q9HCE7 757 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 RBFOX1Q9NWB1 397 aaKnown RBP20.12■□□□□ 0.81
CPSF4-207ENST00000451876 SSR3Q9UNL2 185 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 MED13LQ71F56 2210 aa20.12■□□□□ 0.81
CPSF4-207ENST00000451876 LOC100506127A0A0U1RQW1 187 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 CEACAM18A8MTB9 384 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 SMAD7O15105 426 aaKnown RBP20.11■□□□□ 0.81
CPSF4-207ENST00000451876 NXPH2O95156 264 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 GYPAP02724 150 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 TFF1P04155 84 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 ACP7Q6ZNF0 438 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 CENPOQ9BU64 300 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 SLITRK2Q9H156 845 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 DNAJB11Q9UBS4 358 aa20.11■□□□□ 0.81
CPSF4-207ENST00000451876 TRAV38-1A0A0B4J264 116 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 CYB5AP00167 134 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 SFTPBP07988 381 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 MUC1P15941 1255 aaPredicted RBP20.1■□□□□ 0.81
CPSF4-207ENST00000451876 PTGFRP43088 359 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 LMO4P61968 165 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 MICBQ29980 383 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 LYPD2Q6UXB3 125 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 OR4D6Q8NGJ1 314 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 COX4I2Q96KJ9 171 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 FUNDC2Q9BWH2 189 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 NLKQ9UBE8 527 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 IL36RNQ9UBH0 155 aa20.1■□□□□ 0.81
CPSF4-207ENST00000451876 AK6Q9Y3D8 172 aaKnown RBP20.1■□□□□ 0.81
CPSF4-207ENST00000451876 MEGF11A6BM72 1044 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 TRAPPC2LH3BP13 241 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 CDRT1O95170 752 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 IGHV2-5P01817 119 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 CALCBP10092 127 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 STUMQ69YW2 141 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 SAXO1Q8IYX7 474 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 SPICQ8N5J4 248 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 PNLDC1Q8NA58 520 aaKnown RBP20.09■□□□□ 0.81
CPSF4-207ENST00000451876 ZSCAN4Q8NAM6 433 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-207ENST00000451876 TNFRSF13BO14836 293 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-207ENST00000451876 KDM4BO94953 1096 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 AMY2BP19961 511 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 SMIM21Q3B7S5 101 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 DCDC5Q6ZRR9 648 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 CDH26Q8IXH8 852 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 PXT1Q8NFP0 134 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 OR10K1Q8NGX5 313 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 ZNF665Q9H7R5 613 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 RASL12Q9NYN1 266 aa20.09■□□□□ 0.81
CPSF4-207ENST00000451876 TRAV1-2A0A0B4J238 106 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 A0A1B0GW55 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 OR2AT4A6NND4 320 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 AIREO43918 545 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L2P0CJ85 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L3P0CJ86 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L4P0CJ87 422 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L5P0CJ88 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L6P0CJ89 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L7P0CJ90 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 MYL9P24844 172 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 TGFBR1P36897 503 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 SEC61A1P61619 476 aaKnown RBP20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4L9Q6RFH8 374 aaPredicted RBP20.08■□□□□ 0.8
CPSF4-207ENST00000451876 ANGPTL6Q8NI99 470 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 EMG1Q92979 244 aaKnown RBP20.08■□□□□ 0.8
CPSF4-207ENST00000451876 C12orf43Q96C57 262 aaKnown RBP20.08■□□□□ 0.8
CPSF4-207ENST00000451876 CTSZQ9UBR2 303 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DUX4Q9UBX2 424 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 GSTK1Q9Y2Q3 226 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 DOCK11Q5JSL3 2073 aa20.08■□□□□ 0.8
CPSF4-207ENST00000451876 IGKV1D-17A0A075B6S4 117 aa20.07■□□□□ 0.8
CPSF4-207ENST00000451876 PSG2P11465 335 aa20.07■□□□□ 0.8
CPSF4-207ENST00000451876 CEBPDP49716 269 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-207ENST00000451876 OR10A3P58181 314 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms