RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 NEK6Q9HC98 313 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 SMURF1Q9HCE7 757 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 OR5V1Q9UGF6 321 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 BLOC1S6Q9UL45 172 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
COL3A1-203ENST00000450867 CUBNO60494 3623 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 IGKV1D-17A0A075B6S4 117 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 IGHV2-70DA0A0C4DH43 119 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 OR2AT4A6NND4 320 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 GPR37O15354 613 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 FAM157CP0CG43 387 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 PSG2P11465 335 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 GABARAPL2P60520 117 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 GPR50Q13585 617 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 SPHARQ15513 63 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 Q499Y3 187 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 C1orf229Q6ZS94 237 aaPredicted RBP11.93□□□□□ -0.5
COL3A1-203ENST00000450867 SLC36A1Q7Z2H8 476 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 TMEM106AQ96A25 262 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 SDSLQ96GA7 329 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 DMRTB1Q96MA1 342 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 GAFA1Q96PS6 74 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 BEX2Q9BXY8 128 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 ISYNA1Q9NPH2 558 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
COL3A1-203ENST00000450867 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 DVL1O14640 695 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 SIGLEC5O15389 551 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 TMPRSS2O15393 492 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 MRPS14O60783 128 aaKnown RBP11.92□□□□□ -0.5
COL3A1-203ENST00000450867 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-203ENST00000450867 FSHBP01225 129 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 OCM2P0CE71 109 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 CELP19835 753 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 FSTP19883 344 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 MTCP1P56278 107 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 PAX8Q06710 450 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 PDZK1IP1Q13113 114 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 TBCEQ15813 527 aaPredicted RBP11.92□□□□□ -0.5
COL3A1-203ENST00000450867 CD276Q5ZPR3 534 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 MKXQ8IYA7 352 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 Q8IYB0 196 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 ZFP41Q8N8Y5 198 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 RAB40AQ8WXH6 277 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 THRSPQ92748 146 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 MED30Q96HR3 178 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 CEP19Q96LK0 163 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 ZNF488Q96MN9 340 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 CCL13Q99616 98 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
COL3A1-203ENST00000450867 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
COL3A1-203ENST00000450867 A0A1B0GW55 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 NKX6-3A6NJ46 265 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 C22orf46C9J442 243 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 NXPH2O95156 264 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 KNG1P01042 644 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 AVPP01185 164 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 ALDOBP05062 364 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L2P0CJ85 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L3P0CJ86 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L4P0CJ87 422 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L5P0CJ88 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L6P0CJ89 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L7P0CJ90 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 IGFBP3P17936 291 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-203ENST00000450867 RAB3AP20336 220 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 SOX2P48431 317 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 CAV3P56539 151 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 ZP1P60852 638 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 IL13RA1P78552 427 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4L9Q6RFH8 374 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-203ENST00000450867 SLC25A26Q70HW3 274 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 C1QL2Q7Z5L3 287 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 MS4A15Q8N5U1 240 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 FAM216BQ8N7L0 139 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 ZSCAN4Q8NAM6 433 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-203ENST00000450867 OR5T2Q8NGG2 359 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 OR13C5Q8NGS8 318 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 SNTG1Q9NSN8 517 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 DUX4Q9UBX2 424 aa11.91□□□□□ -0.5
COL3A1-203ENST00000450867 LOC105371242A0A075B767 164 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 F8VVB4 439 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 F8VWA3 439 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
COL3A1-203ENST00000450867 SC5DO75845 299 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 GMFBP60983 142 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 TPBGQ13641 420 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 KISS1Q15726 138 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 KRTAP21-3Q3LHN1 58 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
COL3A1-203ENST00000450867 RNF144BQ7Z419 303 aa11.9□□□□□ -0.5
COL3A1-203ENST00000450867 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms