RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DNAAF1Q8NEP3 725 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 OR51A4Q8NGJ6 313 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 PP6455Q8WZ26 134 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 STMN2Q93045 179 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 FGGYQ96C11 551 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 DUX5Q96PT3 197 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 ADI1Q9BV57 179 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 ALG8Q9BVK2 526 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 INPP5EQ9NRR6 644 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 RPL36Q9Y3U8 105 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-204ENST00000449062 FAM230AA0A1W2PPH8 454 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 NKX6-3A6NJ46 265 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 ANKRD65E5RJM6 399 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 CLIC3O95833 236 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 HTR1AP08908 422 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 GABRA2P47869 451 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 ACTA2P62736 377 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 ACTG2P63267 376 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 SMIM21Q3B7S5 101 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 KLHL22Q53GT1 634 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNF691Q5VV52 312 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 Q6YL49 198 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 RNF144BQ7Z419 303 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 VMO1Q7Z5L0 202 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 TRMT10AQ8TBZ6 339 aaKnown RBP11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 NPRL2Q8WTW4 380 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 C8orf4Q9NR00 106 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 POLDIP2Q9Y2S7 368 aa11.55□□□□□ -0.56
RTFDC1-204ENST00000449062 RNASEK-C17orf49H0YIS7 233 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 CASQ2O14958 399 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 GATBO75879 557 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ZFPL1O95159 310 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 SERPINA3P01011 423 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 MT-ND2P03891 347 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 HKR1P10072 659 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ATF1P18846 271 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 PEX2P28328 305 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 RCN1Q15293 331 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 OGFRL1Q5TC84 451 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 LAIR2Q6ISS4 152 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNF561Q8N587 486 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNF555Q8NEP9 628 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 GATAD2BQ8WXI9 593 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 LHX4Q969G2 390 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ZMAT3Q9HA38 289 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 PLEKHA1Q9HB21 404 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 ELL3Q9HB65 397 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 HHLA2Q9UM44 414 aa11.54□□□□□ -0.56
RTFDC1-204ENST00000449062 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 K7N7A8 449 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 M0R1W7 72 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 ZNF737O75373 536 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 ALX3O95076 343 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 NXPH2O95156 264 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 KNG1P01042 644 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 NDUFB7P17568 137 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 DCKP27707 260 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 RBP2P50120 134 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 ETV1P50549 477 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 DLX1P56177 255 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 TTC23Q5W5X9 447 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 SLC25A26Q70HW3 274 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 BATF2Q8N1L9 274 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 CNIH3Q8TBE1 160 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 RPS4Y2Q8TD47 263 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 H1FXQ92522 213 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 BORCS8Q96FH0 119 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 AJUBAQ96IF1 538 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 CEP19Q96LK0 163 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 C19orf12Q9NSK7 152 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 ONECUT1Q9UBC0 465 aa11.53□□□□□ -0.56
RTFDC1-204ENST00000449062 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 HOXA3O43365 443 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 TK1P04183 234 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 MELTFP08582 738 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 PRKACBP22694 351 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 CFPP27918 469 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 NPBWR2P48146 333 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 GTF2A1P52655 376 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 ATP1B3P54709 279 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 ACTG1P63261 375 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 PRB3Q04118 309 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 MRPL28Q13084 256 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 XAF1Q6GPH4 301 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 PDZD9Q8IXQ8 264 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 CMTM4Q8IZR5 234 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 DHRSXQ8N5I4 330 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 TMEM86BQ8N661 226 aa11.52□□□□□ -0.57
RTFDC1-204ENST00000449062 ZNF485Q8NCK3 441 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms