RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
GTF3C3-206ENST00000448539 IGKV1-27A0A075B6S5 117 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 PPIAL4CA0A0B4J2A2 164 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 TRBV5-5A0A0J9YX44 114 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 OR2AT4A6NND4 320 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 NDUFB3O43676 98 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 NOS1APO75052 506 aaPredicted RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 INMTO95050 263 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 ALX3O95076 343 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 HSMCR30P0CW71 290 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 SRP14P37108 136 aaKnown RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 LRRC10Q5BKY1 277 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 CD276Q5ZPR3 534 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 STUMQ69YW2 141 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 Q8IYB0 196 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 BATF2Q8N1L9 274 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 TEX29Q8N6K0 151 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 OR13C5Q8NGS8 318 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 THRSPQ92748 146 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 SLAMF9Q96A28 289 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 NRIP2Q9BQI9 281 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 DNTTIP1Q9H147 329 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 CTSZQ9UBR2 303 aa11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 FN1P02751 2386 aaKnown RBP11.68□□□□□ -0.54
GTF3C3-206ENST00000448539 KIAA1324LA8MWY0 1029 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 TRAPPC2LH3BP13 241 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 DVL1O14640 695 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ACAA1P09110 424 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 PSG2P11465 335 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 MAPK3P27361 379 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 PDZK1IP1Q13113 114 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 IKZF1Q13422 519 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 FIP1L1Q6UN15 594 aaKnown RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 SATL1Q86VE3 508 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 MS4A15Q8N5U1 240 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 FAM216BQ8N7L0 139 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ANGPTL6Q8NI99 470 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 RAB40AQ8WXH6 277 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 UFD1Q92890 307 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 RFT1Q96AA3 541 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 GPER1Q99527 375 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 LSM2Q9Y333 95 aaKnown RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 ANK3Q12955 4377 aaKnown RBP11.67□□□□□ -0.54
GTF3C3-206ENST00000448539 RFPL4AA6NLU0 287 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 ZNF879B4DU55 563 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 RFPL4AL1F8VTS6 287 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 SPRY1O43609 319 aaPredicted RBP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 ENSAO43768 121 aaKnown RBP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 MRPS14O60783 128 aaKnown RBP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 TMEM225BP0DP42 221 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 SRD5A1P18405 259 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 MAP2K4P45985 399 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 IL13RA1P78552 427 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 GPR50Q13585 617 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 KISS1Q15726 138 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 SVOPQ8N4V2 548 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 OR5D18Q8NGL1 313 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 TMEM138Q9NPI0 162 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 MMP26Q9NRE1 261 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 MTCH1Q9NZJ7 389 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 OR14J1Q9UGF5 321 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.66□□□□□ -0.54
GTF3C3-206ENST00000448539 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 IGKV1D-17A0A075B6S4 117 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 A0A1B0GW55 424 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 GPR37O15354 613 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 SIGLEC5O15389 551 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 ECDO95905 644 aaPredicted RBP11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 KNG1P01042 644 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 ALDOBP05062 364 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L2P0CJ85 424 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L3P0CJ86 424 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L4P0CJ87 422 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L5P0CJ88 424 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L6P0CJ89 424 aa11.65□□□□□ -0.54
GTF3C3-206ENST00000448539 DUX4L7P0CJ90 424 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms