RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ING4Q9UNL4 249 aa14.49□□□□□ -0.09
LIME1-202ENST00000444951 LRRC30A6NM36 301 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 AKR7A2O43488 359 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 CRLF1O75462 422 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 GABARAPO95166 117 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 PTBP3O95758 552 aaKnown RBP14.48□□□□□ -0.09
LIME1-202ENST00000444951 CYB5AP00167 134 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 CALCBP10092 127 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 RAB3BP20337 219 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 CD80P33681 288 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 SERPINB10P48595 397 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 MTNR1BP49286 362 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 CAV3P56539 151 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 PDZK1IP1Q13113 114 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 FAM201AQ5SY85 155 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 CRIP3Q6Q6R5 217 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 OR51F2Q8NH61 342 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 ZNF671Q8TAW3 534 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 ERGIC1Q969X5 290 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 TLNRD1Q9H1K6 362 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 PLGRKTQ9HBL7 147 aa14.48□□□□□ -0.09
LIME1-202ENST00000444951 DYSFO75923 2080 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 WNT9BO14905 357 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 PPIHO43447 177 aaKnown RBP14.47□□□□□ -0.09
LIME1-202ENST00000444951 EGR1P18146 543 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 CTF1Q16619 201 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 AVPI1Q5T686 147 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 HES5Q5TA89 166 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 MKXQ8IYA7 352 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 Q8TCH9 128 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 HPS1Q92902 700 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 S100A13Q99584 98 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 PKIBQ9C010 78 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 CNTD2Q9H8S5 307 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 MRPS28Q9Y2Q9 187 aaKnown RBP14.47□□□□□ -0.09
LIME1-202ENST00000444951 POLDIP2Q9Y2S7 368 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 CEPT1Q9Y6K0 416 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 V9GY05 133 aa14.47□□□□□ -0.09
LIME1-202ENST00000444951 SVEP1Q4LDE5 3571 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 MXRA5Q9NR99 2828 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 IGHV3OR15-7A0A075B7D8 119 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 CLDN25C9JDP6 229 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 TRAPPC2LH3BP13 241 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 TMEM178BH3BS89 294 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 RP2O75695 350 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 PTGFRP43088 359 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 PDLIM4P50479 330 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 ZP1P60852 638 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 IL24Q13007 206 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 P2RY14Q15391 338 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 AWAT2Q6E213 333 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 SFRP4Q6FHJ7 346 aaPredicted RBP14.46□□□□□ -0.09
LIME1-202ENST00000444951 CLEC2AQ6UVW9 174 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 C1QL2Q7Z5L3 287 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 C1orf87Q8N0U7 546 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 DEFB108BQ8NET1 73 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 OR4D6Q8NGJ1 314 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 OR10K1Q8NGX5 313 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 NDNFQ8TB73 568 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 SEH1LQ96EE3 360 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 CHODLQ9H9P2 273 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 MTCH1Q9NZJ7 389 aa14.46□□□□□ -0.09
LIME1-202ENST00000444951 IGHV4-30-2A0A087WSY4 118 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 A0A096LNT2 108 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 IGKV1-12A0A0C4DH73 117 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 ISPDA4D126 451 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 DPPA5A6NC42 116 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 IFNL4K9M1U5 179 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 IGKV1D-12P01611 117 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 SLC2A2P11168 524 aaPredicted RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 BCL3P20749 454 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 GLRA1P23415 457 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 MPZP25189 248 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 RPS19P39019 145 aaKnown RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 NPBWR2P48146 333 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 TMBIM6P55061 237 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 SNU13P55769 128 aaKnown RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 CLDN12P56749 244 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 MRPS11P82912 194 aaKnown RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 RSU1Q15404 277 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 RAB11BQ15907 218 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 GLIPR1L1Q6UWM5 242 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 TPRA1Q86W33 373 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 GCSAMQ8N6F7 178 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 FAM168AQ92567 244 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 ISOC1Q96CN7 298 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 FOXRED1Q96CU9 486 aaPredicted RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 CEP19Q96LK0 163 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 WDR13Q9H1Z4 485 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 NARFLQ9H6Q4 476 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 STAB1Q9NY15 2570 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 YLPM1P49750 1951 aaKnown RBP14.45□□□□□ -0.1
LIME1-202ENST00000444951 TANC2Q9HCD6 1990 aa14.45□□□□□ -0.1
LIME1-202ENST00000444951 F8VVB4 439 aa14.44□□□□□ -0.1
LIME1-202ENST00000444951 F8VWA3 439 aa14.44□□□□□ -0.1
LIME1-202ENST00000444951 NXPH2O95156 264 aa14.44□□□□□ -0.1
LIME1-202ENST00000444951 HTR3BO95264 441 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms