RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PHYHIPQ92561 330 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 SLAMF9Q96A28 289 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 DERL3Q96Q80 235 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 SMR3AQ99954 134 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 FAM192AQ9GZU8 254 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 ELL3Q9HB65 397 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-208ENST00000444533 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 SNTG1Q9NSN8 517 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 F8P00451 2351 aa11.8□□□□□ -0.52
SSBP3-208ENST00000444533 A0A0G2JMP0 313 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 A0A0X1KG70 313 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 A0A1W2PPK0 400 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 CCRL2O00421 344 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 NDUFB3O43676 98 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 RGS9O75916 674 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 WNT2P09544 360 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 EGR1P18146 543 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 GATA3P23771 443 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 ZNF93P35789 620 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 IL13RA1P78552 427 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 LCN2P80188 198 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 HNRNPA0Q13151 305 aaKnown RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 HSD17B12Q53GQ0 312 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 UBE2UQ5VVX9 321 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 BTNL3Q6UXE8 466 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 ACP7Q6ZNF0 438 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 PHC2Q8IXK0 858 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 ZSCAN4Q8NAM6 433 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 OR4M2Q8NGB6 313 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
SSBP3-208ENST00000444533 RFT1Q96AA3 541 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 TMEM186Q96B77 213 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 SPACA5Q96QH8 159 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 NRIP2Q9BQI9 281 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 WDR13Q9H1Z4 485 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 NOX4Q9NPH5 578 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
SSBP3-208ENST00000444533 IGKV1-27A0A075B6S5 117 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 F5H0A9 414 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-208ENST00000444533 GPR37O15354 613 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 GPX5O75715 221 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 INMTO95050 263 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 KNG1P01042 644 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 MAS1P04201 325 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 RBMXP38159 391 aaKnown RBP11.78□□□□□ -0.52
SSBP3-208ENST00000444533 CAPZA1P52907 286 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 RSU1Q15404 277 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 JAGN1Q8N5M9 183 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 OR5T2Q8NGG2 359 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 OR5D18Q8NGL1 313 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 TNFAIP8L1Q8WVP5 186 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-208ENST00000444533 HIF1ANQ9NWT6 349 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
SSBP3-208ENST00000444533 CR1P17927 2039 aa11.77□□□□□ -0.52
SSBP3-208ENST00000444533 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 CSTBP04080 98 aaKnown RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 GPR176Q14439 515 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 NEDD8Q15843 81 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ATPAF1Q5TC12 328 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 GLT8D1Q68CQ7 371 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 STUMQ69YW2 141 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF529Q6P280 563 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 FAHD2BQ6P2I3 314 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 CDH26Q8IXH8 852 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 FAM58AQ8N1B3 248 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 OR52N4Q8NGI2 321 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 OR51A2Q8NGJ7 313 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 FOXRED1Q96CU9 486 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 FAHD2AQ96GK7 314 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 ZNF488Q96MN9 340 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 NR1H4Q96RI1 486 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-208ENST00000444533 CCL13Q99616 98 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 METTL9Q9H1A3 318 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 MTCH1Q9NZJ7 389 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 LPAR3Q9UBY5 353 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 OR14J1Q9UGF5 321 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 HIVEP1P15822 2718 aa11.77□□□□□ -0.53
SSBP3-208ENST00000444533 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 PPIAL4CA0A0B4J2A2 164 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 RFPL4AA6NLU0 287 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 A8MXK9 166 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 RFPL4AL1F8VTS6 287 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 J3QLI3 93 aa11.76□□□□□ -0.53
SSBP3-208ENST00000444533 DVL1O14640 695 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms