RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NKX1-2Q9UD57 310 aaPredicted RBP15.38■□□□□ 0.05
CCDC188-202ENST00000444532 HSPE1-MOB4S4R3N1 261 aa15.38■□□□□ 0.05
CCDC188-202ENST00000444532 RFPL4AA6NLU0 287 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 RFPL4AL1F8VTS6 287 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 H0YAE9 185 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 TFF1P04155 84 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 CCDC159P0C7I6 412 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 LIMS3P0CW19 117 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 LIMS4P0CW20 117 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 NDUFB7P17568 137 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 PRKACBP22694 351 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 PRDX2P32119 198 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 RBP2P50120 134 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 ATP1B3P54709 279 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 ERVK11-1P61568 191 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 CMTM4Q8IZR5 234 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 KIR3DL3Q8N743 410 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.37■□□□□ 0.05
CCDC188-202ENST00000444532 ZNRF1Q8ND25 227 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 H1FXQ92522 213 aaKnown RBP15.37■□□□□ 0.05
CCDC188-202ENST00000444532 ESM1Q9NQ30 184 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 MAB21L2Q9Y586 359 aa15.37■□□□□ 0.05
CCDC188-202ENST00000444532 IGKV1-27A0A075B6S5 117 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 TMEM212A6NML5 194 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 ATF1P18846 271 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 CAPGP40121 348 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 C1orf122Q6ZSJ8 110 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 ZNF561Q8N587 486 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 CD177Q8N6Q3 437 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 OR13C3Q8NGS6 347 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 OR5AK2Q8NH90 309 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 ZNF48Q96MX3 618 aaPredicted RBP15.36■□□□□ 0.05
CCDC188-202ENST00000444532 COMMD4Q9H0A8 199 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 VCXQ9H320 206 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 ONECUT1Q9UBC0 465 aa15.36■□□□□ 0.05
CCDC188-202ENST00000444532 CAB39Q9Y376 341 aaPredicted RBP15.36■□□□□ 0.05
CCDC188-202ENST00000444532 IGKV1-9A0A0C4DH69 117 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 CENPVL3A0A0U1RRI6 287 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 SLC1A7O00341 560 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 ZFPL1O95159 310 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 KNG1P01042 644 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 MTCP1P56278 107 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 UBA52P62987 128 aaKnown RBP15.35■□□□□ 0.05
CCDC188-202ENST00000444532 BRD3OSQ6XYD6 125 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 TMPRSS11AQ6ZMR5 421 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 MKXQ8IYA7 352 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 TMEM185AQ8NFB2 350 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 OR51A4Q8NGJ6 313 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 OR10AC1Q8NH08 325 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 GATAD2BQ8WXI9 593 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 SPSB1Q96BD6 273 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 CEP19Q96LK0 163 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 ZMAT3Q9HA38 289 aaKnown RBP15.35■□□□□ 0.05
CCDC188-202ENST00000444532 MTCH1Q9NZJ7 389 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 DIMT1Q9UNQ2 313 aaKnown RBP15.35■□□□□ 0.05
CCDC188-202ENST00000444532 STAB1Q9NY15 2570 aa15.35■□□□□ 0.05
CCDC188-202ENST00000444532 TRBV23-1A0A0A0MS06 115 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 TRBV2A0A0J9YWF9 115 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 E9PI62 339 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 MT-ND2P03891 347 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 PRTN3P24158 256 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 AZGP1P25311 298 aaKnown RBP15.34■□□□□ 0.05
CCDC188-202ENST00000444532 ETV1P50549 477 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 BAMBIQ13145 260 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 CCDC58Q4VC31 144 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 LHFPL2Q6ZUX7 228 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 SLC25A26Q70HW3 274 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 VMO1Q7Z5L0 202 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 Q8IYB0 196 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 C8orf59Q8N0T1 100 aaPredicted RBP15.34■□□□□ 0.05
CCDC188-202ENST00000444532 LHX4Q969G2 390 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 PRDM13Q9H4Q3 707 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 NEK6Q9HC98 313 aa15.34■□□□□ 0.05
CCDC188-202ENST00000444532 EXOSC1Q9Y3B2 195 aaKnown RBP15.34■□□□□ 0.05
CCDC188-202ENST00000444532 IGHV1-69DA0A0B4J2H0 117 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 A0A1W2PQ09 198 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 H0YHG0 523 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 M0R1W7 72 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 ALX3O95076 343 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 CYB5AP00167 134 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 IGHV1-69P01742 117 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 OCM2P0CE71 109 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 OCMP0CE72 109 aaPredicted RBP15.33■□□□□ 0.04
CCDC188-202ENST00000444532 MYL12AP19105 171 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 CAPZA1P52907 286 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 SLC34A1Q06495 639 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 MED21Q13503 144 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 RPL22L1Q6P5R6 122 aaKnown RBP15.33■□□□□ 0.04
CCDC188-202ENST00000444532 METAP1DQ6UB28 335 aaPredicted RBP15.33■□□□□ 0.04
CCDC188-202ENST00000444532 SERPINA12Q8IW75 414 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 OR5D14Q8NGL3 314 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 SLAMF9Q96A28 289 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 TMEM80Q96HE8 168 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 OPALINQ96PE5 141 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 PDCD1LG2Q9BQ51 273 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 FAM234AQ9H0X4 552 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 ZCCHC4Q9H5U6 513 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 OR14J1Q9UGF5 321 aa15.33■□□□□ 0.04
CCDC188-202ENST00000444532 SOX21Q9Y651 276 aaPredicted RBP15.33■□□□□ 0.04
CCDC188-202ENST00000444532 DNAJC9-AS1A6NH13 148 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms