RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 EHFQ9NZC4 300 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 MMACHCQ9Y4U1 282 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 UNC13CQ8NB66 2214 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 A0A1W2PQD3 144 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 H3BQ15 152 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 ADAM10O14672 748 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 GMFGO60234 142 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 GDF9O60383 454 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 C1QL1O75973 258 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 HEXBP07686 556 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 FOLR1P15328 257 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 PGCP20142 388 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 PPP1CCP36873 323 aaKnown RBP10.45□□□□□ -0.74
LTBR-203ENST00000441074 GABRA4P48169 554 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 DCAF7P61962 342 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 ARFRP1Q13795 201 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 HLA-BQ31612 363 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 GFI1BQ5VTD9 330 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 OR5R1Q8NH85 324 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 M1APQ8TC57 530 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 HPSE2Q8WWQ2 592 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 ARHGAP5-AS1Q96IT6 56 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 RARRES2Q99969 163 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 ST6GALNAC5Q9BVH7 336 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 PCED1AQ9H1Q7 454 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 PRO1933Q9H354 126 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 SIRT7Q9NRC8 400 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 TCFL5Q9UL49 500 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 TP53TG5Q9Y2B4 290 aa10.45□□□□□ -0.74
LTBR-203ENST00000441074 TMEM150CB9EJG8 249 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 K7N7A8 449 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 HCRTR2O43614 444 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 GP1BBP13224 206 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 CEACAM6P40199 344 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 ECI1P42126 302 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 SNU13P55769 128 aaKnown RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 UBE2KP61086 200 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 ZNF343Q6P1L6 599 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 GUSBP11Q6P575 273 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 POMZP3Q6PJE2 187 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 LINC00346Q8IVM7 164 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 SGPP2Q8IWX5 399 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 RNF133Q8WVZ7 376 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 MISP3Q96FF7 219 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 TMEM59Q9BXS4 323 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 TGIF2Q9GZN2 237 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 CENPMQ9NSP4 180 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 SEC16AO15027 2179 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 LILRA5A6NI73 299 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 MBPP02686 304 aaPredicted RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 IL12BP29460 328 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 APOBEC1P41238 236 aaKnown RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 FOXO1Q12778 655 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 CHAF1BQ13112 559 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 C1orf189Q5VU69 101 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 PMS2CLQ68D20 193 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 APCDD1LQ8NCL9 501 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 OR10AD1Q8NGE0 317 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 PTPMT1Q8WUK0 201 aaPredicted RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 MRPL24Q96A35 216 aaKnown RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 RBM14Q96PK6 669 aaKnown RBP10.44□□□□□ -0.74
LTBR-203ENST00000441074 PBOV1Q9GZY1 135 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 SH3BGRL3Q9H299 93 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 BANF2Q9H503 90 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 HS3ST3B1Q9Y662 390 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 CEP192Q8TEP8 1941 aa10.44□□□□□ -0.74
LTBR-203ENST00000441074 A0A1B0GWJ7 208 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 PLPP3O14495 311 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 HSD17B6O14756 317 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 SCGB1D2O95969 90 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 SERPINA2P20848 420 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 POLR2HP52434 150 aaKnown RBP10.43□□□□□ -0.74
LTBR-203ENST00000441074 ERVFRD-1P60508 538 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 DNM1P34Q6PK57 102 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 SHISA6Q6ZSJ9 500 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 RNF144BQ7Z419 303 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 TMEM68Q96MH6 324 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 ADOQ96SZ5 270 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 URM1Q9BTM9 101 aaKnown RBP10.43□□□□□ -0.74
LTBR-203ENST00000441074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.74
LTBR-203ENST00000441074 PILRBQ9UKJ0 227 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 TMEM131Q92545 1883 aa10.43□□□□□ -0.74
LTBR-203ENST00000441074 ALG1L2C9J202 215 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 TCAPO15273 167 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 TRGC2P03986 189 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 CTSDP07339 412 aaPredicted RBP10.42□□□□□ -0.74
LTBR-203ENST00000441074 FABP4P15090 132 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 GLB1P16278 677 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 ZNF20P17024 532 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 GLIPR1P48060 266 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 PDZD11Q5EBL8 140 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 OR2T2Q6IF00 324 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 TCEAL6Q6IPX3 200 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 SLC22A25Q6T423 547 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 KLHL24Q6TFL4 600 aa10.42□□□□□ -0.74
LTBR-203ENST00000441074 PLXDC2Q6UX71 529 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms