RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 ELL3Q9HB65 397 aaPredicted RBP12.88□□□□□ -0.35
IFT140-204ENST00000439987 SLC7A11Q9UPY5 501 aa12.88□□□□□ -0.35
IFT140-204ENST00000439987 A0A1W2PR80 420 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 SOCS1O15524 211 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 WDR1O75083 606 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 CD3DP04234 171 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 NMBP08949 121 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 TMEM225BP0DP42 221 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 TAS2R19P59542 299 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 RAP2BP61225 183 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 FJX1Q86VR8 437 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 FAM89BQ8N5H3 189 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 OR4D10Q8NGI6 311 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 RAB3CQ96E17 227 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 BOD1Q96IK1 185 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 FIGNL2A6NMB9 653 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 HPXP02790 462 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 PTGER4P35408 488 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 CBX5P45973 191 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 ZMYND11Q15326 602 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 TBC1D28Q2M2D7 210 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 LINC00303Q3SY05 128 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 STEAP1BQ6NZ63 245 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 TMEM229BQ8NBD8 167 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 BVESQ8NE79 360 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 C1orf162Q8NEQ5 155 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 STEAP2Q8NFT2 490 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 OR8S1Q8NH09 359 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 DVL3Q92997 716 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 PROCRQ9UNN8 238 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 PRELID3BQ9Y3B1 194 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 KLF2Q9Y5W3 355 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 IGF2RP11717 2491 aa12.87□□□□□ -0.35
IFT140-204ENST00000439987 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
IFT140-204ENST00000439987 ZNF850A8MQ14 1090 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 ABCD4O14678 606 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 CYB5AP00167 134 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 CGAP01215 116 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 HIST1H1DP16402 221 aaKnown RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 ATP1B3P54709 279 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 TMEM50BP56557 158 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 TSC22D1Q15714 1073 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 TRAPPC6BQ86SZ2 158 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 RTN4RL2Q86UN3 420 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 CD163Q86VB7 1156 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 NUDCD2Q8WVJ2 157 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 PAPOLGQ9BWT3 736 aaKnown RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 POFUT1Q9H488 388 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 SPRY1O43609 319 aaPredicted RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 CRHP06850 196 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 CELA3BP08861 270 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 GSTP1P09211 210 aaKnown RBP12.86□□□□□ -0.35
IFT140-204ENST00000439987 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 OR5L1Q8NGL2 311 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 METTL9Q9H1A3 318 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 GPR160Q9UJ42 338 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 FLVCR2Q9UPI3 526 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 KCNK7Q9Y2U2 307 aa12.86□□□□□ -0.35
IFT140-204ENST00000439987 A0A1B0GW55 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 PCP4L1A6NKN8 68 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 ANGPTL7O43827 346 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 PLATP00750 562 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 HOXC12P31275 282 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 IDH3GP51553 393 aaPredicted RBP12.85□□□□□ -0.35
IFT140-204ENST00000439987 C1orf185Q5T7R7 199 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 ASCL4Q6XD76 172 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 OPN3Q9H1Y3 402 aaPredicted RBP12.85□□□□□ -0.35
IFT140-204ENST00000439987 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 ZNF71Q9NQZ8 489 aaPredicted RBP12.85□□□□□ -0.35
IFT140-204ENST00000439987 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 FOXI3A8MTJ6 420 aaPredicted RBP12.85□□□□□ -0.35
IFT140-204ENST00000439987 J3QW42 95 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 RP2O75695 350 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 NDUFB6O95139 128 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 CST4P01036 141 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 CXCL2P19875 107 aa12.85□□□□□ -0.35
IFT140-204ENST00000439987 CPT2P23786 658 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms