RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TM2D1Q9BX74 207 aa4.13□□□□□ -1.75
EDEM3-203ENST00000439962 NMES1Q9C002 83 aa4.13□□□□□ -1.75
EDEM3-203ENST00000439962 PRDM14Q9GZV8 571 aa4.13□□□□□ -1.75
EDEM3-203ENST00000439962 PFDN2Q9UHV9 154 aa4.13□□□□□ -1.75
EDEM3-203ENST00000439962 V9GYS6 101 aa4.13□□□□□ -1.75
EDEM3-203ENST00000439962 MFSD2BA6NFX1 497 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 SERPINE3A8MV23 424 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 SMLR1H3BR10 107 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PSMD9O00233 223 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MTRF1O75570 445 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PLAUP00749 431 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CD3DP04234 171 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FCER2P06734 321 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 LYL1P12980 280 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 HLA-DOBP13765 273 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF20P17024 532 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CXCL2P19875 107 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ANXA7P20073 488 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZBTB25P24278 435 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MPGP29372 298 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 OTX1P32242 354 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 NTF4P34130 210 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 OPRM1P35372 400 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 EFNB2P52799 333 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 BIDP55957 195 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 TAS2R46P59540 309 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 AWAT2Q6E213 333 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ADAM5Q6NVV9 412 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 C11orf88Q6PI97 169 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 GSG1LQ6UXU4 331 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FAM214BQ7L5A3 538 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 TMEM17Q86X19 198 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CXorf67Q86X51 503 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MUC20Q8N307 709 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 BPIFB2Q8N4F0 458 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PNLDC1Q8NA58 520 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 GJC3Q8NFK1 279 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 STOML3Q8TAV4 291 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 NEUROG1Q92886 237 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RBPMSQ93062 196 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ELMOD3Q96FG2 381 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PHB2Q99623 299 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 DPCDQ9BVM2 203 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CST11Q9H112 138 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PPA2Q9H2U2 334 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RGCCQ9H4X1 137 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MED29Q9NX70 200 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 NKIRAS2Q9NYR9 191 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 COMMD9Q9P000 198 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 EDARQ9UNE0 448 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FLVCR2Q9UPI3 526 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PIGBOS1A0A0B4J2F0 54 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 DBX1A6NMT0 343 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF726A6NNF4 738 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 POM121CA8CG34 1229 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 A8MXK9 166 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 AMY2AP04746 511 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MSR1P21757 451 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 TFF3Q07654 80 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MADCAM1Q13477 382 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MELKQ14680 651 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RNASE12Q5GAN4 147 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ATPAF1Q5TC12 328 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 TMPPEQ6ZT21 453 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PEG10Q86TG7 708 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 HOGA1Q86XE5 327 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 SUN5Q8TC36 379 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 S100PBPQ96BU1 408 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 POFUT1Q9H488 388 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PNRC2Q9NPJ4 139 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PCDHB16Q9NRJ7 776 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CA10Q9NS85 328 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CLCF1Q9UBD9 225 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 LHFPL6Q9Y693 200 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 HCFC1P51610 2035 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 A0A1W2PPR1 153 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CLEC18AA5D8T8 446 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FOXI3A8MTJ6 420 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 A8MXE2 369 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 SMAD9O15198 467 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 BCL2L11O43521 198 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 MRPL33O75394 65 aaKnown RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 RLN1P04808 185 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FGF2P09038 288 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PATE4P0C8F1 98 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 PET100P0DJ07 73 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF43P17038 809 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 IL32P24001 234 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 FPR2P25090 351 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 CD34P28906 385 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF93P35789 620 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 GUCA1AP43080 201 aaPredicted RBP4.12□□□□□ -1.75
EDEM3-203ENST00000439962 ZNF83P51522 516 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 H2BFSP57053 126 aa4.12□□□□□ -1.75
EDEM3-203ENST00000439962 EIF5AP63241 154 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms