RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 CSTBP04080 98 aaKnown RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 CSF3P09919 207 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SLC2A2P11168 524 aaPredicted RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 DAOP14920 347 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 RAB6AP20340 208 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 DNASE1P24855 282 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 CDKN1AP38936 164 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 PMELP40967 661 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 CAV3P56539 151 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 QRFPP83859 136 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SPRNQ5BIV9 151 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 IDNKQ5T6J7 187 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 FIP1L1Q6UN15 594 aaKnown RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 C1QL2Q7Z5L3 287 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 LRRC75A-AS1Q8N1F1 130 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SLAMF9Q96A28 289 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SLIRPQ9GZT3 109 aaKnown RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 NXF2Q9GZY0 626 aaKnown RBP10.69□□□□□ -0.7
SCLT1-202ENST00000439369 SPATA2Q9UM82 520 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 ING4Q9UNL4 249 aa10.69□□□□□ -0.7
SCLT1-202ENST00000439369 DSCAMO60469 2012 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 AKR7A2O43488 359 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 ANGPTL7O43827 346 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 RHBDL1O75783 438 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 SCGNO76038 276 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 NXPH2O95156 264 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 GTF2F2P13984 249 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM33P57088 247 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 KRTAP10-9P60411 292 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FGF12P61328 243 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 P2RY14Q15391 338 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 C2orf76Q3KRA6 126 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 SLC22A6Q4U2R8 563 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 SPIN3Q5JUX0 258 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 HIST2H2BCQ6DN03 193 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 ZNF826PQ6ZT77 177 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 LINC00596Q86U02 117 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 FAM58AQ8N1B3 248 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 GCSAMQ8N6F7 178 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 OR51D1Q8NGF3 324 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 OR51T1Q8NGJ9 327 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 MMP27Q9H306 513 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 CHODLQ9H9P2 273 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 ELL3Q9HB65 397 aaPredicted RBP10.68□□□□□ -0.7
SCLT1-202ENST00000439369 HMG20AQ9NP66 347 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 PTTG2Q9NZH5 202 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 RAB22AQ9UL26 194 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 PLEKHA6Q9Y2H5 1048 aa10.68□□□□□ -0.7
SCLT1-202ENST00000439369 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 HRNRQ86YZ3 2850 aaPredicted RBP10.67□□□□□ -0.7
SCLT1-202ENST00000439369 IGHV3-64DA0A0J9YX35 117 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 CLDN25C9JDP6 229 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 NDUFS8O00217 210 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 KNG1P01042 644 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 IGHV4-39P01824 125 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 MUC1P15941 1255 aaPredicted RBP10.67□□□□□ -0.7
SCLT1-202ENST00000439369 BCL3P20749 454 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 GLRA1P23415 457 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 PTH2RP49190 550 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 CLDN12P56749 244 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 DSCR9P59020 149 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 IL13RA2Q14627 380 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 KCNJ8Q15842 424 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 TEX36Q5VZQ5 186 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 LINC00299Q6ZSB3 139 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 PEG10Q86TG7 708 aaKnown RBP10.67□□□□□ -0.7
SCLT1-202ENST00000439369 OSR2Q8N2R0 312 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 MCFD2Q8NI22 146 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 LGALS14Q8TCE9 139 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 CCL17Q92583 94 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
SCLT1-202ENST00000439369 YIPF5Q969M3 257 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 TIMD4Q96H15 378 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 URM1Q9BTM9 101 aaKnown RBP10.67□□□□□ -0.7
SCLT1-202ENST00000439369 TM2D1Q9BX74 207 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 TMEM59Q9BXS4 323 aa10.67□□□□□ -0.7
SCLT1-202ENST00000439369 DNTTIP1Q9H147 329 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms