RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 FCGR3AP08637 254 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 DBHP09172 617 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 HOXA1P49639 335 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 RPUSD3Q6P087 351 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 GALNTL5Q7Z4T8 443 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 FOXRED2Q8IWF2 684 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 FAM71E2Q8N5Q1 922 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 OR9K2Q8NGE7 335 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 PLEKHJ1Q9NW61 149 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 FBXL17Q9UF56 701 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 ANXA10Q9UJ72 324 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 FOXD3Q9UJU5 478 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 EDARQ9UNE0 448 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 AMDHD2Q9Y303 409 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 MED12Q93074 2177 aa14.29□□□□□ -0.12
CLCNKA-203ENST00000439316 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 B4E171 279 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 NPIPA2E9PIF3 369 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 NPIPA3F8WFD2 350 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 FBXO24O75426 580 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 FARS2O95363 451 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 KLK3P07288 261 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 SFTA3P0C7M3 94 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 TSPAN7P41732 249 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 RAB13P51153 203 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 SUCLG1P53597 346 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 SMCO1Q147U7 214 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 SNAI3Q3KNW1 292 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 GGNBP1Q5YKI7 109 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 OPN5Q6U736 354 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 PLXDC2Q6UX71 529 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 PRSS33Q8NF86 280 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 SPTSSAQ969W0 71 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 MRPL24Q96A35 216 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 PRRX2Q99811 253 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 PADI1Q9ULC6 663 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 LOXL2Q9Y4K0 774 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 POMT1Q9Y6A1 747 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 EML6Q6ZMW3 1958 aa14.28□□□□□ -0.12
CLCNKA-203ENST00000439316 LOC102723996A0A087X1L8 192 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 FAM157AC9JC47 383 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 JTBO76095 146 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 IFNA21P01568 189 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 CELA2AP08217 269 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 FCGR2CP31995 323 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 SHEQ5VZ18 495 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 MR1Q95460 341 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 SPSB1Q96BD6 273 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 SGK3Q96BR1 496 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 FBXO17Q96EF6 278 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 CPNE2Q96FN4 548 aaPredicted RBP14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 UCN2Q96RP3 112 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 RBM24Q9BX46 236 aaKnown RBP14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 STRADBQ9C0K7 418 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 GPR173Q9NS66 373 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 PLEK2Q9NYT0 353 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 HSF4Q9ULV5 492 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 LHX6Q9UPM6 363 aa14.27□□□□□ -0.12
CLCNKA-203ENST00000439316 OR5H8P0DN80 308 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 TMEM225BP0DP42 221 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 LIFP15018 202 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 CRYGSP22914 178 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 F2RL1P55085 397 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 DMBX1Q8NFW5 382 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 LYPD6BQ8NI32 183 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 INTS12Q96CB8 462 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 NTNG2Q96CW9 530 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 NAA11Q9BSU3 229 aaPredicted RBP14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 ANGPTL4Q9BY76 406 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 METTL9Q9H1A3 318 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 LIME1Q9H400 295 aa14.27□□□□□ -0.13
CLCNKA-203ENST00000439316 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 DTYMKP23919 212 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 ACKR3P25106 362 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 NFYBP25208 207 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 TMEM33P57088 247 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 MRPS34P82930 218 aaKnown RBP14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM3AP98173 230 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM27BQ5VT28 67 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 RAET1LQ5VY80 246 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 C20orf196Q8IYI0 205 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 ULBP2Q9BZM5 246 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 WDR54Q9H977 334 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 PROK2Q9HC23 129 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 FAM86C1Q9NVL1 165 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 AK3Q9UIJ7 227 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 FREM2Q5SZK8 3169 aa14.26□□□□□ -0.13
CLCNKA-203ENST00000439316 MEX3AA1L020 520 aaKnown RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 C9JQL5 133 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 ZIC3O60481 467 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 CCL3P10147 92 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 MTCP1P56278 107 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 DSCR4P56555 118 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 PDZK1IP1Q13113 114 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 DCAF12Q5T6F0 453 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 Q6ZRG5 221 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 SKA3Q8IX90 412 aa14.25□□□□□ -0.13
CLCNKA-203ENST00000439316 UBAC2Q8NBM4 344 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms