RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCL15-CCL14A0A0B4J2E2 113 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGHV1-3A0A0C4DH29 117 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 FAM240AA0A1B0GVK7 77 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ISPDA4D126 451 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 CENPBD1B2RD01 187 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 RPL36A-HNRNPH2H7BZ11 118 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 J3QT63 122 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 K7EM74 188 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 K7EN84 100 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 PSMD11O00231 422 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 PRMT5O14744 637 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ENSAO43768 121 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 SCO1O75880 301 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 MMP7P09237 267 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 LIPCP11150 499 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF616Q08AN1 781 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 TAL2Q16559 108 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 CCL15Q16663 113 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 KLHL12Q53G59 568 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 HHATQ5VTY9 493 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 UNQ9165/PRO28630Q6UXU0 137 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF101Q8IZC7 436 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZCCHC24Q8N2G6 241 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 TMEM105Q8N8V8 129 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR2Z1Q8NG97 314 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 LRRC20Q8TCA0 184 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 C19orf60Q96EN9 201 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 MSANTD3Q96H12 275 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF2Q9BSG1 426 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 RTBDNQ9BSG5 229 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZNF717Q9BY31 904 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 STMN4Q9H169 189 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 VCX3AQ9NNX9 186 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 HECW1Q76N89 1606 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 ABCA10Q8WWZ4 1543 aa2.02□□□□□ -2.09
TRAPPC13-204ENST00000438419 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 LOC102724200A0A096LPH7 203 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGHV6-1A0A0B4J1U7 121 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 LOC100506127A0A0U1RQW1 187 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ANKRD20A5PA0PJZ0 165 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 RAB19A4D1S5 217 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 NDUFS5O43920 106 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ALOX12BO75342 701 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 CDRT1O95170 752 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 IGLV3-19P01714 112 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR5AL1P0C617 328 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 CD28P10747 220 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 PAX6P26367 422 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 IL3RAP26951 378 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 PSMB5P28074 263 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 PRSS3P35030 304 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ERFP50548 548 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 HADHBP55084 474 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ADIGQ0VDE8 80 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 LAMTOR4Q0VGL1 99 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 DYNC1I2Q13409 638 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 PRSS8Q16651 343 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 Q3ZCU0 254 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 LIN9Q5TKA1 542 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR6N2Q8NGY6 317 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR8K3Q8NH51 312 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 HGDQ93099 445 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 RMI2Q96E14 147 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 C20orf144Q9BQM9 153 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 PRRG3Q9BZD7 231 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZSCAN16Q9H4T2 348 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 CSNK1G1Q9HCP0 422 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 RBMX2Q9Y388 322 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ORC6Q9Y5N6 252 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 S4R3C0 116 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 DLC1Q96QB1 1528 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 MAGI2Q86UL8 1455 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 ATRNO75882 1429 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 IQGAP1P46940 1657 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 DNMT1P26358 1616 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 KIAA1671Q9BY89 1806 aa2.01□□□□□ -2.09
TRAPPC13-204ENST00000438419 CEACAM18A8MTB9 384 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 CCNOP22674 350 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 PSMB2P49721 201 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 RGS6P49758 472 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 GRB2P62993 217 aaKnown RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TNNC1P63316 161 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 IL5RAQ01344 420 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TTC32Q5I0X7 151 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 DEGS2Q6QHC5 323 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SPERTQ8NA61 448 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 OR5M1Q8NGP8 315 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ZFAND1Q8TCF1 268 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TMIGD2Q96BF3 282 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 WDR34Q96EX3 536 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 MRPL48Q96GC5 212 aaKnown RBP2□□□□□ -2.09
TRAPPC13-204ENST00000438419 SMARCD1Q96GM5 515 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 GLT1D1Q96MS3 346 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 TBL1XR1Q9BZK7 514 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 COA1Q9GZY4 146 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 ING2Q9H160 280 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 PORCNQ9H237 461 aa2□□□□□ -2.09
TRAPPC13-204ENST00000438419 PLEKHF2Q9H8W4 249 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms