RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CYYR1Q96J86 154 aa22.13■■□□□ 1.13
CPNE1-216ENST00000437340 FN3KRPQ9HA64 309 aa22.13■■□□□ 1.13
CPNE1-216ENST00000437340 URB1O60287 2271 aaKnown RBP22.13■■□□□ 1.13
CPNE1-216ENST00000437340 AHRRA9YTQ3 701 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 SIX6O95475 246 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 SFTPBP07988 381 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF35P13682 527 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 IGHV1-2P23083 117 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 DTYMKP23919 212 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 CD34P28906 385 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 OR2A2Q6IF42 318 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 OVCH2Q7RTZ1 564 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 CALHM1Q8IU99 346 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 GCNT2Q8N0V5 402 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 FBXL14Q8N1E6 418 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 FAM122AQ96E09 287 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF230Q9UIE0 474 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-216ENST00000437340 GPR132Q9UNW8 380 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 PLSCR5A0PG75 271 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 C9orf170A2RU37 121 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 CD300LBA8K4G0 201 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 WISP2O76076 250 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 C4BPBP20851 252 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 PPP1R1AQ13522 171 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 TBC1D28Q2M2D7 210 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 CHRFAM7AQ494W8 412 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 MARCH1Q8TCQ1 289 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 MITD1Q8WV92 249 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 HPSE2Q8WWQ2 592 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 BOD1Q96IK1 185 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 PPA2Q9H2U2 334 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 ST3GAL6Q9Y274 331 aa22.12■■□□□ 1.13
CPNE1-216ENST00000437340 GEMIN2O14893 280 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 RRP8O43159 456 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 HLA-GP17693 338 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 FPR2P25090 351 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 PMELP40967 661 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 RBM11P57052 281 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 UBE2NP61088 152 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 GRK1Q15835 563 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 NSUN5P2Q63ZY6 315 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 SLC25A26Q70HW3 274 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 PEG10Q86TG7 708 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 TMEM200AQ86VY9 491 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 TMEM185AQ8NFB2 350 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 OR5A2Q8NGI9 324 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 OR6K3Q8NGY3 331 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 TAAR6Q96RI8 345 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF701Q9NV72 531 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 SLC23A1Q9UHI7 598 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 NOP16Q9Y3C1 178 aaKnown RBP22.11■■□□□ 1.13
CPNE1-216ENST00000437340 MPC1Q9Y5U8 109 aa22.11■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A10PA6NDY2 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A18PA6NE21 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A16PA6NEW6 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A20PA6NIJ5 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A8PA6NJQ4 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A7PA6NKC0 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A22PA8MWA6 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A12PA8MX19 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A5PA8MXJ8 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A23PA8MXZ1 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 PRSS44E7EML9 344 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A15PP0C7V4 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A13PP0C7W8 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A14PP0C7W9 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAM90A24PP0C7X0 464 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF14P17017 642 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF81P51508 661 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 IL13RA1P78552 427 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 SRSF4Q08170 494 aaKnown RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 MRPL49Q13405 166 aaKnown RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 PIGYQ3MUY2 71 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 DCAF12L2Q5VW00 463 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 ELP2Q6IA86 826 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 OR10AD1Q8NGE0 317 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 OR5M8Q8NGP6 311 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 HIST1H2AAQ96QV6 131 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 FAAP24Q9BTP7 215 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 EHFQ9NZC4 300 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 AK3Q9UIJ7 227 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 OSGIN2Q9Y236 505 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 HMSDA8MTL9 139 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 KIR2DL2P43627 348 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 PER3P56645 1201 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 SURF2Q15527 256 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 ACSF3Q4G176 576 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 LY6G6FQ5SQ64 297 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 LIN54Q6MZP7 749 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 C9orf106Q8NAJ2 232 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 OR5M9Q8NGP3 310 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 OR13G1Q8NGZ3 307 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 PHB2Q99623 299 aa22.1■■□□□ 1.13
CPNE1-216ENST00000437340 CMSS1Q9BQ75 279 aaKnown RBP22.1■■□□□ 1.13
CPNE1-216ENST00000437340 MGAQ8IWI9 3026 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 ANKRD30BLA7E2S9 258 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 ZNHIT1O43257 154 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 PDCD6O75340 191 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 GABRA6Q16445 453 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 TMEM128Q5BJH2 165 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms