RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SLAMF6Q96DU3 332 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 SHDQ96IW2 340 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 C5orf34Q96MH7 638 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 PADI1Q9ULC6 663 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 CLDN16Q9Y5I7 305 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 B3GALT1Q9Y5Z6 326 aa9.73□□□□□ -0.85
SEMA4D-209ENST00000429836 A6NIZ1 184 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 DVL1O14640 695 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 OR4A8P0C604 315 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 SLC37A1P57057 533 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 RAP1BP61224 184 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 PHLDA2Q53GA4 152 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 ABHD12BQ7Z5M8 362 aaPredicted RBP9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 OR10S1Q8NGN2 331 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 VWCEQ96DN2 955 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 MED29Q9NX70 200 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 MCTS1Q9ULC4 181 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 A6NNC1 897 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 MARCH11A6NNE9 402 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 PLPP3O14495 311 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 MMP9P14780 707 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 HLA-DRB3P79483 266 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 EWSR1Q01844 656 aaKnown RBP eCLIP9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 GPM6BQ13491 265 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 OGFOD3Q6PK18 319 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 TMEM183AQ8IXX5 376 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 SUMF1Q8NBK3 374 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 BEND2Q8NDZ0 799 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 RNF133Q8WVZ7 376 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 HAS2Q92819 552 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 CDCA3Q99618 268 aaPredicted RBP9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 PECRQ9BY49 303 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 KIAA1456Q9P272 454 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 MRPS23Q9Y3D9 190 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-209ENST00000429836 DOCK8Q8NF50 2099 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 CPAMD8Q8IZJ3 1885 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 CCDC163A0A0D9SF12 145 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 DXOO77932 396 aaKnown RBP9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 ONECUT2O95948 504 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 CLPSP04118 112 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 IFI6P09912 130 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 FXYD4P59646 89 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 RUNX1Q01196 453 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 GPR157Q5UAW9 335 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 C6orf201Q7Z4U5 140 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 LRP11Q86VZ4 500 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 OR5L1Q8NGL2 311 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 GAL3ST4Q96RP7 486 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 URM1Q9BTM9 101 aaKnown RBP9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 HRASLS2Q9NWW9 162 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 ZNF319Q9P2F9 582 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 SLC7A11Q9UPY5 501 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 CBY1Q9Y3M2 126 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 SPAG17Q6Q759 2223 aa9.71□□□□□ -0.85
SEMA4D-209ENST00000429836 CFAP54Q96N23 3096 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 CTSDP07339 412 aaPredicted RBP9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 RAB11AP62491 216 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 COL10A1Q03692 680 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 WDR25Q64LD2 544 aaPredicted RBP9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 GPR137CQ8N3F9 429 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 ARHGEF39Q8N4T4 335 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 C11orf40Q8WZ69 217 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 EMC6Q9BV81 110 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 ELL3Q9HB65 397 aaPredicted RBP9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 IL17BQ9UHF5 180 aa9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 NXT1Q9UKK6 140 aaKnown RBP9.71□□□□□ -0.86
SEMA4D-209ENST00000429836 TMED7-TICAM2A0A0A6YYA0 188 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 KLF8O95600 359 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 NPSP0C0P6 89 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 CSNK1A1P48729 337 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 RRADP55042 308 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 RPS21P63220 83 aaKnown RBP9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 FUT7Q11130 342 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 TMEM187Q14656 261 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 P2RY6Q15077 328 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 SLC35E3Q7Z769 313 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 STT3BQ8TCJ2 826 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 WFIKKN1Q96NZ8 548 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 GPR84Q9NQS5 396 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 THAP10Q9P2Z0 257 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 COL4A2P08572 1712 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 IGSF23A1L1A6 192 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 CD55P08174 381 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 TMEM225BP0DP42 221 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 CLEC12BQ2HXU8 276 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 TMEM171Q8WVE6 324 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 CALHM2Q9HA72 323 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 GAB2Q9UQC2 676 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 CNTRLQ7Z7A1 2325 aa9.7□□□□□ -0.86
SEMA4D-209ENST00000429836 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.69□□□□□ -0.86
SEMA4D-209ENST00000429836 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms