RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 PPP1R2P9O14990 202 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 FGF17O60258 216 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 AQP8O94778 261 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ZNF17P17021 662 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 CLDN12P56749 244 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 CTU2Q2VPK5 515 aaKnown RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 TMEM268Q5VZI3 342 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 TMEM81Q6P7N7 255 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 VRK3Q8IV63 474 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 OR2D3Q8NGH3 330 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 OR1L3Q8NH93 324 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SCARB1Q8WTV0 552 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 YIPF5Q969M3 257 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 C10orf90Q96M02 699 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 GPR78Q96P69 363 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 OR8B4Q96RC9 309 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 TAF9BQ9HBM6 251 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SLC2A9Q9NRM0 540 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 RGPD1P0DJD0 1748 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ZNF354AO60765 605 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 PTTG1O95997 202 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SLC25A4P12235 298 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 NTF3P20783 257 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 FCGR2CP31995 323 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 OR51S1Q8NGJ8 323 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 RNF141Q8WVD5 230 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 PLA2G2FQ9BZM2 168 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 DUSP15Q9H1R2 295 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 PSG11Q9UQ72 335 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 NME2P1O60361 137 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ALX3O95076 343 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ACAA1P09110 424 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 H2AFB1P0C5Y9 115 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 CD40P25942 277 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 RPL18Q07020 188 aaKnown RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 KCNRGQ8N5I3 272 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 OR10J6PQ8NGY7 276 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 ARRDC2Q8TBH0 407 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 SGK494Q96LW2 274 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 PARP11Q9NR21 331 aa5.12□□□□□ -1.59
HERC4-206ENST00000427635 AHDC1Q5TGY3 1603 aaPredicted RBP5.12□□□□□ -1.59
HERC4-206ENST00000427635 PAPPA2Q9BXP8 1791 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TEX50A0A1B0GTY4 177 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 NME4O00746 187 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SPRY1O43609 319 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 ADRA2AP08913 450 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 NPPBP16860 134 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 BSGP35613 385 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 GALR1P47211 349 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 PFN3P60673 137 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 FAM3AP98173 230 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 FAM106AQ4KMX7 169 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SOWAHCQ53LP3 525 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 SOHLH1Q5JUK2 328 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 OR2G6Q5TZ20 316 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SVBPQ8N300 66 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 EGLN2Q96KS0 407 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SDF2Q99470 211 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SRSF8Q9BRL6 282 aaKnown RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 PLA2G12AQ9BZM1 189 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 VSIG4Q9Y279 399 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 IGHV1OR21-1A0A087WYE8 117 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 NPIPB6E9PJ23 425 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 HSBP1O75506 76 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 DCTDP32321 178 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TFPI2P48307 235 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 ENDOGQ14249 297 aaKnown RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 IQCJQ1A5X6 159 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SAXO2Q658L1 398 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 H3F3CQ6NXT2 135 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 WDR74Q6RFH5 385 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 CYHR1Q6ZMK1 362 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TBC1D26Q86UD7 250 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TGIF2LXQ8IUE1 241 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TMEM116Q8NCL8 245 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 MARCH1Q8TCQ1 289 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SSC4DQ8WTU2 575 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 EXTL1Q92935 676 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 DVL3Q92997 716 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 PERPQ96FX8 193 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 OR2A5Q96R48 311 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 ARHGDIGQ99819 225 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 R3HDMLQ9H3Y0 253 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 FBXO8Q9NRD0 319 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 ZNF230Q9UIE0 474 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 C4AP0C0L4 1744 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 NALCNQ8IZF0 1738 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 RGPD8O14715 1765 aaPredicted RBP5.11□□□□□ -1.59
HERC4-206ENST00000427635 A0A1W2PPQ1 181 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 G3V2L1 256 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 PLPP1O14494 284 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 TAAR5O14804 337 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 PPM1DO15297 605 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 SP9P0CG40 484 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 ALOX5APP20292 161 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 MAGEA5P43359 124 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 EMDP50402 254 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 FZD5Q13467 585 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 RNF212Q495C1 297 aa5.11□□□□□ -1.59
HERC4-206ENST00000427635 FAM71E1Q6IPT2 247 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms