RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NPRL2Q8WTW4 380 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 LRRC29Q8WV35 223 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 TSEN15Q8WW01 171 aaKnown RBP6.2□□□□□ -1.42
LINC01049-201ENST00000426840 SEH1LQ96EE3 360 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 TIMD4Q96H15 378 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 C1orf159Q96HA4 380 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 TECTBQ96PL2 329 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 SMR3AQ99954 134 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 TMEM246Q9BRR3 403 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 SLC7A11Q9UPY5 501 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 LRCH1Q9Y2L9 728 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 ABCA1O95477 2261 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 OTOGQ6ZRI0 2925 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 CSPG4Q6UVK1 2322 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 F8P00451 2351 aa6.2□□□□□ -1.42
LINC01049-201ENST00000426840 A0A1W2PPK0 400 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 hCG_1807616A0A1W2PRN6 198 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TRIM64CA6NLI5 447 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 J3QT63 122 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 SULT1B1O43704 296 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 NOS1APO75052 506 aaPredicted RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 INMTO95050 263 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ALDOBP05062 364 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 CD2P06729 351 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 WNT2P09544 360 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 OCM2P0CE71 109 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 HSMCR30P0CW71 290 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 IGHV4-31P0DP07 118 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 AMY2BP19961 511 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 CD80P33681 288 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 HAAOP46952 286 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 RBP2P50120 134 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ATP1B3P54709 279 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 MTCP1P56278 107 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ERVK11-1P61568 191 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 BTG1P62324 171 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 RPS25P62851 125 aaKnown RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 IL24Q13007 206 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 CNN3Q15417 329 aaKnown RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 SSX1Q16384 188 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TMEM249Q2WGJ8 235 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ZNF404Q494X3 552 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TEX36Q5VZQ5 186 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 SFRP4Q6FHJ7 346 aaPredicted RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 LYPD2Q6UXB3 125 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TMEM91Q6ZNR0 172 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 BOLLQ8N9W6 283 aaKnown RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 POC1AQ8NBT0 407 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 DEFB108BQ8NET1 73 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 OR51A2Q8NGJ7 313 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 UFD1Q92890 307 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TMEM106AQ96A25 262 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 SPSB1Q96BD6 273 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 BORCS8Q96FH0 119 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ZNF488Q96MN9 340 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 DERL3Q96Q80 235 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 SPACA5Q96QH8 159 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 OR14A2Q96R54 314 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TMED9Q9BVK6 235 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 PKIBQ9C010 78 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 WDR13Q9H1Z4 485 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 PPIL3Q9H2H8 161 aaKnown RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 NARFLQ9H6Q4 476 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ZNF696Q9H7X3 374 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 PATZ1Q9HBE1 687 aaKnown RBP6.19□□□□□ -1.42
LINC01049-201ENST00000426840 TAS2R4Q9NYW5 299 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 MTCH1Q9NZJ7 389 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 ARHGAP32A7KAX9 2087 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 HIVEP1P15822 2718 aa6.19□□□□□ -1.42
LINC01049-201ENST00000426840 MALRD1Q5VYJ5 2156 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 DOCK11Q5JSL3 2073 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 TRAV8-7A0A075B6U6 113 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 A0A087WXM4 84 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 TRAV38-1A0A0B4J264 116 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 IGKV1-12A0A0C4DH73 117 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 ISPDA4D126 451 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 OOEPA6NGQ2 149 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 CEACAM18A8MTB9 384 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 FAM157AC9JC47 383 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 F5H0A9 414 aaPredicted RBP6.18□□□□□ -1.42
LINC01049-201ENST00000426840 F8VVB4 439 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 F8VWA3 439 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 AKR7A2O43488 359 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 PSPNO60542 156 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 TNFAIP8O95379 198 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 LY6G6DO95868 133 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 IGKV1D-12P01611 117 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 IGHV2-5P01817 119 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 PGA5P0DJD9 388 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 CD37P11049 281 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 RAB3AP20336 220 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 MDH2P40926 338 aaKnown RBP6.18□□□□□ -1.42
LINC01049-201ENST00000426840 ZP1P60852 638 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 FABP5Q01469 135 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 PDZK1IP1Q13113 114 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 TRAM1Q15629 374 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 KISS1Q15726 138 aa6.18□□□□□ -1.42
LINC01049-201ENST00000426840 FAM27D1Q5T7N8 215 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms