RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM27BQ5VT28 67 aa12.21□□□□□ -0.45
RPL28-202ENST00000426763 POC1BQ8TC44 478 aa12.21□□□□□ -0.45
RPL28-202ENST00000426763 PRRX1P54821 245 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 OXA1LQ15070 435 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 CEBPEQ15744 281 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 CCDC71Q8IV32 467 aaPredicted RBP12.21□□□□□ -0.46
RPL28-202ENST00000426763 C2orf50Q96LR7 162 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 PIGMQ9H3S5 423 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 RNF7Q9UBF6 113 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 AMMECR1Q9Y4X0 333 aaPredicted RBP12.21□□□□□ -0.46
RPL28-202ENST00000426763 SMLR1H3BR10 107 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 FPR2P25090 351 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 GABRA4P48169 554 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 RFESDQ8TAC1 157 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 OR8B2Q96RD0 313 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 SSX3Q99909 188 aa12.21□□□□□ -0.46
RPL28-202ENST00000426763 A0A0A6YYJ9 748 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 E5RGE8 158 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 NME2P1O60361 137 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 CSRP1P21291 193 aaKnown RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 BAK1Q16611 211 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 FAM74A1Q5RGS3 127 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 ZNF770Q6IQ21 691 aaPredicted RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 MOGAT3Q86VF5 341 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 LYG1Q8N1E2 194 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 OR2G3Q8NGZ4 309 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 MED30Q96HR3 178 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 TDRD6O60522 2096 aaKnown RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 PCMT1P22061 227 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 THNSL2Q86YJ6 484 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 TAF9BQ9HBM6 251 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 SLC52A3Q9NQ40 469 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 RLFQ13129 1914 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 PRR19A6NJB7 356 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 K7EQM0 130 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 CYTIPO60759 359 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 IL11P20809 199 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 ID4P47928 161 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 TLE1Q04724 770 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 TINAGL1Q9GZM7 467 aaPredicted RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 SLIRPQ9GZT3 109 aaKnown RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 OPN3Q9H1Y3 402 aaPredicted RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 PLEKHA2Q9HB19 425 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 OR2F2O95006 317 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 MMP16P51512 607 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 OR2F1Q13607 317 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 PINX1Q96BK5 328 aaKnown RBP12.2□□□□□ -0.46
RPL28-202ENST00000426763 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
RPL28-202ENST00000426763 OR4C45A6NMZ5 311 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 RPS4Y1P22090 263 aaKnown RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 CEACAM3P40198 252 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 LINC00303Q3SY05 128 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 ERRFI1Q9UJM3 462 aaPredicted RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 J3QT63 122 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 HRASP01112 189 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 IAPPP10997 89 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 MGAT2Q10469 447 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 FRZBQ92765 325 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 PSG11Q9UQ72 335 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 CTSSP25774 331 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 ELLP55199 621 aaPredicted RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 FOXO1Q12778 655 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 STUMQ69YW2 141 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 NAA40Q86UY6 237 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 UBAC2Q8NBM4 344 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 POM121L2Q96KW2 1035 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 CDIPTO14735 213 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 ATXN7O15265 892 aaPredicted RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 GDF9O60383 454 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 TXNDC12O95881 172 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 CRYBA1P05813 215 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 ZDHHC22Q8N966 263 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 OR5A2Q8NGI9 324 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 WDFY2Q96P53 400 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 MTFP1Q9UDX5 166 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 DSPPQ9NZW4 1301 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 SNAPINO95295 136 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
RPL28-202ENST00000426763 PSMB3P49720 205 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
RPL28-202ENST00000426763 SLC7A10Q9NS82 523 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms